Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0987
         (359 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101327-1|AAI01328.1|  550|Homo sapiens chromosome 5 open readi...    30   2.5  
BC101326-1|AAI01327.1|  550|Homo sapiens chromosome 5 open readi...    30   2.5  
BC101325-1|AAI01326.1|  550|Homo sapiens chromosome 5 open readi...    30   2.5  
BC065750-1|AAH65750.1|  251|Homo sapiens C5orf37 protein protein.      30   2.5  
AK093098-1|BAC04054.1|  550|Homo sapiens protein ( Homo sapiens ...    30   2.5  
BC052803-1|AAH52803.1|  678|Homo sapiens forkhead box P4 protein.      29   5.7  
BC040962-1|AAH40962.1|  667|Homo sapiens forkhead box P4 protein.      29   5.7  
AL139331-4|CAH72542.1|  678|Homo sapiens forkhead box P4 protein.      29   5.7  
AL139331-3|CAH72540.1|  680|Homo sapiens forkhead box P4 protein.      29   5.7  
AL139331-2|CAH72541.1|  667|Homo sapiens forkhead box P4 protein.      29   5.7  
AB080747-1|BAC53809.1|  680|Homo sapiens fork head-related prote...    29   5.7  
BC060868-1|AAH60868.1|  685|Homo sapiens BMPER protein protein.        28   7.6  
AY324650-1|AAP89012.1|  685|Homo sapiens crossveinless-2 protein.      28   7.6  
AK096150-1|BAC04712.1|  685|Homo sapiens protein ( Homo sapiens ...    28   7.6  
AB075845-1|BAB85551.1|  565|Homo sapiens KIAA1965 protein protein.     28   7.6  

>BC101327-1|AAI01328.1|  550|Homo sapiens chromosome 5 open reading
           frame 37 protein.
          Length = 550

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 282 VELDKEVDVHLTHASAR*VSSRIFSAGRDSDPVVDSFAKQLL 157
           +E+ K  D H++  S    SS + S  + S PV+D F+  LL
Sbjct: 60  IEVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLL 101


>BC101326-1|AAI01327.1|  550|Homo sapiens chromosome 5 open reading
           frame 37 protein.
          Length = 550

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 282 VELDKEVDVHLTHASAR*VSSRIFSAGRDSDPVVDSFAKQLL 157
           +E+ K  D H++  S    SS + S  + S PV+D F+  LL
Sbjct: 60  IEVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLL 101


>BC101325-1|AAI01326.1|  550|Homo sapiens chromosome 5 open reading
           frame 37 protein.
          Length = 550

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 282 VELDKEVDVHLTHASAR*VSSRIFSAGRDSDPVVDSFAKQLL 157
           +E+ K  D H++  S    SS + S  + S PV+D F+  LL
Sbjct: 60  IEVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLL 101


>BC065750-1|AAH65750.1|  251|Homo sapiens C5orf37 protein protein.
          Length = 251

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 282 VELDKEVDVHLTHASAR*VSSRIFSAGRDSDPVVDSFAKQLL 157
           +E+ K  D H++  S    SS + S  + S PV+D F+  LL
Sbjct: 85  IEVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLL 126


>AK093098-1|BAC04054.1|  550|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35779 fis, clone TESTI2005380. ).
          Length = 550

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 282 VELDKEVDVHLTHASAR*VSSRIFSAGRDSDPVVDSFAKQLL 157
           +E+ K  D H++  S    SS + S  + S PV+D F+  LL
Sbjct: 60  IEVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLL 101


>BC052803-1|AAH52803.1|  678|Homo sapiens forkhead box P4 protein.
          Length = 678

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = +2

Query: 62  SPGQVGEQRLSQEGWDLLTTA------RAPPKET*QLKSNCFANESTTGSESRPAEKIRL 223
           +PGQ  E  + QEG DL  TA       APPK +  L  +   N   T   SR       
Sbjct: 234 APGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQPTVLTSRRDSSSHE 293

Query: 224 ET 229
           ET
Sbjct: 294 ET 295


>BC040962-1|AAH40962.1|  667|Homo sapiens forkhead box P4 protein.
          Length = 667

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = +2

Query: 62  SPGQVGEQRLSQEGWDLLTTA------RAPPKET*QLKSNCFANESTTGSESRPAEKIRL 223
           +PGQ  E  + QEG DL  TA       APPK +  L  +   N   T   SR       
Sbjct: 235 APGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQPTVLTSRRDSSSHE 294

Query: 224 ET 229
           ET
Sbjct: 295 ET 296


>AL139331-4|CAH72542.1|  678|Homo sapiens forkhead box P4 protein.
          Length = 678

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = +2

Query: 62  SPGQVGEQRLSQEGWDLLTTA------RAPPKET*QLKSNCFANESTTGSESRPAEKIRL 223
           +PGQ  E  + QEG DL  TA       APPK +  L  +   N   T   SR       
Sbjct: 234 APGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQPTVLTSRRDSSSHE 293

Query: 224 ET 229
           ET
Sbjct: 294 ET 295


>AL139331-3|CAH72540.1|  680|Homo sapiens forkhead box P4 protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = +2

Query: 62  SPGQVGEQRLSQEGWDLLTTA------RAPPKET*QLKSNCFANESTTGSESRPAEKIRL 223
           +PGQ  E  + QEG DL  TA       APPK +  L  +   N   T   SR       
Sbjct: 236 APGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQPTVLTSRRDSSSHE 295

Query: 224 ET 229
           ET
Sbjct: 296 ET 297


>AL139331-2|CAH72541.1|  667|Homo sapiens forkhead box P4 protein.
          Length = 667

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = +2

Query: 62  SPGQVGEQRLSQEGWDLLTTA------RAPPKET*QLKSNCFANESTTGSESRPAEKIRL 223
           +PGQ  E  + QEG DL  TA       APPK +  L  +   N   T   SR       
Sbjct: 235 APGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQPTVLTSRRDSSSHE 294

Query: 224 ET 229
           ET
Sbjct: 295 ET 296


>AB080747-1|BAC53809.1|  680|Homo sapiens fork head-related protein
           like A protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = +2

Query: 62  SPGQVGEQRLSQEGWDLLTTA------RAPPKET*QLKSNCFANESTTGSESRPAEKIRL 223
           +PGQ  E  + QEG DL  TA       APPK +  L  +   N   T   SR       
Sbjct: 236 APGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQPTVLTSRRDSSSHE 295

Query: 224 ET 229
           ET
Sbjct: 296 ET 297


>BC060868-1|AAH60868.1|  685|Homo sapiens BMPER protein protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 144 VSFGGARAVVSKSHP-SWLSLCSPTCPG 64
           V+  G R VV   +P   L +C PTCPG
Sbjct: 138 VTESGVRCVVHCKNPLEHLGMCCPTCPG 165


>AY324650-1|AAP89012.1|  685|Homo sapiens crossveinless-2 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 144 VSFGGARAVVSKSHP-SWLSLCSPTCPG 64
           V+  G R VV   +P   L +C PTCPG
Sbjct: 138 VTESGVRCVVHCKNPLEHLGMCCPTCPG 165


>AK096150-1|BAC04712.1|  685|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38831 fis, clone MESAN1000126, weakly similar to
           Drosophila melanogaster Crossveinless 2 (CV-2) mRNA. ).
          Length = 685

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 144 VSFGGARAVVSKSHP-SWLSLCSPTCPG 64
           V+  G R VV   +P   L +C PTCPG
Sbjct: 138 VTESGVRCVVHCKNPLEHLGMCCPTCPG 165


>AB075845-1|BAB85551.1|  565|Homo sapiens KIAA1965 protein protein.
          Length = 565

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 144 VSFGGARAVVSKSHP-SWLSLCSPTCPG 64
           V+  G R VV   +P   L +C PTCPG
Sbjct: 18  VTESGVRCVVHCKNPLEHLGMCCPTCPG 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,943,756
Number of Sequences: 237096
Number of extensions: 851717
Number of successful extensions: 2135
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2135
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)