Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0987
         (359 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069456-1|AAL39601.1|  564|Drosophila melanogaster LD18112p pro...    27   9.5  
AY010585-1|AAG37367.1|  746|Drosophila melanogaster ACP36DE prot...    27   9.5  
AE013599-20|EAA45987.2|  575|Drosophila melanogaster CG17486-PA ...    27   9.5  

>AY069456-1|AAL39601.1|  564|Drosophila melanogaster LD18112p
           protein.
          Length = 564

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 183 VDSFAKQLLLSC*VSFGGARAVVSKSHPSWLSLCSP 76
           +++++ QLL +  ++ G   AV S   P W+  C+P
Sbjct: 193 LNNYSTQLLRNLDLAIGWKTAVESPMSPDWMLNCNP 228


>AY010585-1|AAG37367.1|  746|Drosophila melanogaster ACP36DE
           protein.
          Length = 746

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +2

Query: 44  PKAFPVSPGQVGEQRLSQEGWDLLTTARAPPKET*QLKSNCFANESTTGSESRPAEKIRL 223
           P +   SPGQ+G+Q L Q   +LL   +   K   Q +S    ++S + S+S+   + +L
Sbjct: 342 PSSKSQSPGQLGQQILLQL-QNLLQFQQNQLKSDTQTQSQLQESKSNSLSQSQSQSQEQL 400

Query: 224 ETQR 235
           + QR
Sbjct: 401 QLQR 404


>AE013599-20|EAA45987.2|  575|Drosophila melanogaster CG17486-PA
           protein.
          Length = 575

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 183 VDSFAKQLLLSC*VSFGGARAVVSKSHPSWLSLCSP 76
           +++++ QLL +  ++ G   AV S   P W+  C+P
Sbjct: 204 LNNYSTQLLRNLDLAIGWKTAVESPMSPDWMLNCNP 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,191,258
Number of Sequences: 53049
Number of extensions: 259090
Number of successful extensions: 550
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)