Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0985
         (302 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   0.70 
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   1.2  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   1.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   2.1  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   3.8  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   3.8  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    20   6.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   6.6  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    20   6.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    19   8.7  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    19   8.7  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    19   8.7  

>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 0.70
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 178 GTRREEHHLLRNRP 137
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 178 GTRREEHHLLRNRP 137
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 178 GTRREEHHLLRNRP 137
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 280 VRIPLLLCAHLIHKSPSVPYRPSRPDG 200
           +++P    AH    SP++P+  +R DG
Sbjct: 117 MQLPHPAAAHSALLSPAMPHNLTRHDG 143


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 180 LDRGKAPPSGRD 215
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 180 LDRGKAPPSGRD 215
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 178 GTRREEHHLLRNRP 137
           G R+   HL++N+P
Sbjct: 81  GVRKVIRHLIKNKP 94


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 208 PDGGAFPRSRGTRREEHHLLRNRPCT 131
           P G  F  ++  R+E      + PCT
Sbjct: 669 PSGDCFYENKFYRQEAQWTSSDNPCT 694


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 148 AGDDAPRAVFPSIVGRPRHQGVMVG 222
           AG  +PR    +   RP HQ    G
Sbjct: 62  AGFPSPRGALGAYPFRPMHQNSYTG 86


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 134 ARPVSQEMMLLAPCSPRSWEG 196
           A+P    +   AP  P  WEG
Sbjct: 7   AKPPLGHLRFKAPELPEHWEG 27


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 276 GYLFCSVLISY 244
           GYLFC+ L  Y
Sbjct: 71  GYLFCASLSFY 81


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 242 MYEMSTEQKRYPDPQ 286
           +Y+M    + YPDP+
Sbjct: 90  IYDMHHNPQVYPDPE 104


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 134 ARPVSQEMMLLAPCSPRSWEG 196
           A+P    +   AP +P+ W G
Sbjct: 7   AKPPLGHLRFKAPQAPQPWTG 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,358
Number of Sequences: 336
Number of extensions: 1605
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)