Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0985
(302 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 123 2e-29
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 5e-28
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 5e-28
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 2e-27
SB_56| Best HMM Match : Actin (HMM E-Value=0) 117 2e-27
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 4e-27
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 4e-10
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 4e-10
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 2e-07
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.14
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.14
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.31
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 0.41
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.55
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 0.55
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 0.55
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.55
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 0.55
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.55
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 0.72
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 1.7
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 27 2.9
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 2.9
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 2.9
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 27 2.9
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 27 2.9
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 27 2.9
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 2.9
SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35) 27 3.9
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_34833| Best HMM Match : E6 (HMM E-Value=7.2) 26 5.1
SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6) 26 5.1
SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.1
SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) 26 5.1
SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3) 26 5.1
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 26 6.7
SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1) 26 6.7
SB_28762| Best HMM Match : RVT_1 (HMM E-Value=3.9e-23) 26 6.7
SB_57037| Best HMM Match : RVT_1 (HMM E-Value=3.4e-15) 25 8.9
SB_47153| Best HMM Match : CCG (HMM E-Value=3.4) 25 8.9
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 25 8.9
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 25 8.9
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 25 8.9
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 25 8.9
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 25 8.9
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 25 8.9
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 25 8.9
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 25 8.9
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 25 8.9
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 123 bits (297), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEH 302
AQSKRGILTLKYPIEH
Sbjct: 59 AQSKRGILTLKYPIEH 74
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 119 bits (286), Expect = 5e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHR 261
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DE +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEH 302
AQSKRGILTLKYPIEH
Sbjct: 59 AQSKRGILTLKYPIEH 74
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 119 bits (286), Expect = 5e-28
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHR 261
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DE +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEH 302
AQSKRGILTLKYPIEH
Sbjct: 59 AQSKRGILTLKYPIEH 74
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 117 bits (282), Expect = 2e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHRAK 267
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DE ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEH 302
AQSKRGILTLKYPIEH
Sbjct: 58 AQSKRGILTLKYPIEH 73
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 117 bits (282), Expect = 2e-27
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHRAK 267
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DE ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEH 302
AQSKRGILTLKYPIEH
Sbjct: 58 AQSKRGILTLKYPIEH 73
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 116 bits (279), Expect = 4e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHRAK 267
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DE ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEH 302
AQSKRGILTLKYPIEH
Sbjct: 58 AQSKRGILTLKYPIEH 73
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 4e-10
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 207
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 59.7 bits (138), Expect = 4e-10
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 207
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 2e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 76 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 222
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 44.4 bits (100), Expect = 2e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 100 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 198
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 204 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 88
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 0.31
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 0.41
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 0.55
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 0.55
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 0.55
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 0.55
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 0.55
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 0.55
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 0.72
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 94 EVAALVVDNGSGMCKAGFAGDDAPRAV 174
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 194 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 84
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H L A +HG R +SCET L T
Sbjct: 253 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 100 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 204
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H L A +HG R +SCET L T
Sbjct: 114 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H L A +HG R +SCET L T
Sbjct: 1652 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H L A +HG R +SCET L T
Sbjct: 680 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H L A +HG R +SCET L T
Sbjct: 235 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H L A +HG R +SCET L T
Sbjct: 1090 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H L A +HG R +SCET L T
Sbjct: 33 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H L A +HG R +SCET L T
Sbjct: 114 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1514
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 286 LRVRIPLLLCAHLIHKSPSVPYRPSRPDGGAFPR 185
L+ R+ L LC +I +S V Y GG F R
Sbjct: 1128 LKTRLDLWLCGTIIQQSGPVSYVVKLSSGGVFRR 1161
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 250 LIHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 104
L+ +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 79 KMCDEEVAALVVDNG-SGMCKAGFAGD 156
++CD++ + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_34833| Best HMM Match : E6 (HMM E-Value=7.2)
Length = 135
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 154 LLRNRPCTYRSHCLLP 107
L R R C YRSH LLP
Sbjct: 52 LFRGRYCQYRSHNLLP 67
>SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6)
Length = 184
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -1
Query: 200 RGLPTIE----GNTARGASSPAKPALHIPEPLSTTNAATSSS 87
RG P I NT+RG PA P + PL+ +S+S
Sbjct: 119 RGTPPIREDGYANTSRGDRGPASPHSFLSSPLNLRKQPSSAS 160
>SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 182 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 90
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 171
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 182 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 90
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 200
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 182 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 90
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 146 SQEMMLLAPCSPRSWEGPAIRA*WSVWDRRTLMYEMSTEQKRYPD 280
S E + APCSPRS P I + R + + E TE+ ++ D
Sbjct: 803 SLESSIEAPCSPRSASKPVISGEMNGGPRASHVIE-ETEEGQFDD 846
>SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1)
Length = 535
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -2
Query: 211 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLL 110
+P+G + P+ + +++ HH + T R HC+L
Sbjct: 109 KPNGVSSPKKK--KKKHHHKHEEKHFTDRDHCIL 140
>SB_28762| Best HMM Match : RVT_1 (HMM E-Value=3.9e-23)
Length = 409
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 136
++LSH + H L A +HG RS SCET L
Sbjct: 4 IVLSHLNKH-LSAFNILSEMQHGFRSGFSCETQL 36
>SB_57037| Best HMM Match : RVT_1 (HMM E-Value=3.4e-15)
Length = 291
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLE 76
V+LSH + H L A +HG R+ SCET L H A + + G V L+
Sbjct: 4 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLD 59
>SB_47153| Best HMM Match : CCG (HMM E-Value=3.4)
Length = 328
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 194 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATS 93
LP + +SP PA P P TT + TS
Sbjct: 22 LPDVHSPHFNSVASPPNPASLNPSPTQTTGSPTS 55
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 174 VPLDRGKAPPSGRDGRYGTEGLLCMR*AQSKRG 272
+P G+A P G G G G++ M A K+G
Sbjct: 93 LPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKG 125
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLE 76
V+LSH + H L A +HG R+ SCET L H A + + G V L+
Sbjct: 104 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLD 159
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLE 76
V+LSH + H L A +HG R+ SCET L H A + + G V L+
Sbjct: 104 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLD 159
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLE 76
V+LSH + H L A +HG R+ SCET L H A + + G V L+
Sbjct: 474 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLD 529
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 247 IHKSPSVPYRPSRPDGGAFPRSRGTRREE 161
+++ PS RP P+G P G REE
Sbjct: 235 MNRGPSFANRPPGPEGYRRPSHEGASREE 263
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLE 76
V+LSH + H L A +HG R+ SCET L H A + + G V L+
Sbjct: 137 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLD 192
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 174 VPLDRGKAPPSGRDGRYGTEGLLCMR*AQSKRG 272
+P G+A P G G G G++ M A K+G
Sbjct: 93 LPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKG 125
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLE 76
V+LSH + H L A +HG R+ SCET L H A + + G V L+
Sbjct: 54 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLD 109
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLE 76
V+LSH + H L A +HG R+ SCET L H A + + G V L+
Sbjct: 726 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLD 781
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 270 LFCSVLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
L C + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -2
Query: 238 SPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 86
+P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 137 APLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 247 IHKSPSVPYRPSRPDGGAFPRSRGTRREE 161
+++ PS RP P+G P G REE
Sbjct: 1 MNRGPSFANRPPGPEGYRRPSHEGASREE 29
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLE 76
V+LSH + H L A +HG R+ SCET L H A + + G V L+
Sbjct: 810 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLD 865
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,215,316
Number of Sequences: 59808
Number of extensions: 218686
Number of successful extensions: 661
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 364677581
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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