Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0985
         (302 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         126   2e-31
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         126   2e-31
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         126   2e-31
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          117   1e-28
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   0.63 
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   1.9  
EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.          23   2.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   3.4  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          22   5.9  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    21   7.8  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  126 bits (303), Expect = 2e-31
 Identities = 58/62 (93%), Positives = 60/62 (96%)
 Frame = +1

Query: 82  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHR 261
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DE +
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 262 AK 267
           +K
Sbjct: 61  SK 62



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 255 AQSKRGILTLKYPIEH 302
           AQSKRGILTLKYPIEH
Sbjct: 59  AQSKRGILTLKYPIEH 74


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  126 bits (303), Expect = 2e-31
 Identities = 58/62 (93%), Positives = 60/62 (96%)
 Frame = +1

Query: 82  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHR 261
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DE +
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 262 AK 267
           +K
Sbjct: 61  SK 62



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 255 AQSKRGILTLKYPIEH 302
           AQSKRGILTLKYPIEH
Sbjct: 59  AQSKRGILTLKYPIEH 74


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  126 bits (303), Expect = 2e-31
 Identities = 58/62 (93%), Positives = 60/62 (96%)
 Frame = +1

Query: 82  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHR 261
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DE +
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 262 AK 267
           +K
Sbjct: 61  SK 62



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 255 AQSKRGILTLKYPIEH 302
           AQSKRGILTLKYPIEH
Sbjct: 59  AQSKRGILTLKYPIEH 74


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  117 bits (281), Expect = 1e-28
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = +1

Query: 82  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV*DEHR 261
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YV DE +
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 262 AK 267
           +K
Sbjct: 61  SK 62



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 255 AQSKRGILTLKYPIEH 302
           AQSKRGILTLKYPIEH
Sbjct: 59  AQSKRGILTLKYPIEH 74


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 189 GKAPPSGRDGRYGTEGLLCMR*AQSKRGILTLK 287
           G+  P GRDG +G  GL   +  +   G+  LK
Sbjct: 344 GQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLK 376



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 174 VPLDRGKAPPSGRDGRYGTEGL 239
           VP   G    +GRDG  GT+GL
Sbjct: 167 VPGVPGAPGLAGRDGCNGTDGL 188


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 76  FKMCDEEVAALVVDNGSGMC 135
           +++C E+ A   +DNG+ MC
Sbjct: 42  YRVCHEQHATPQMDNGTVMC 61


>EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 195 PSHDRGEHGARSIISC 148
           P+H RGEHG +    C
Sbjct: 121 PNHARGEHGQQPAERC 136


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 280  VRIPLLLCAHLIHKSPSVP 224
            +++P+L    LIH +PS P
Sbjct: 1780 IKLPILRKDRLIHSTPSSP 1798


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 153 SCETGLAHTGAIVYYQRGNFFVAHLEL 73
           S  TGLAH    +   RG   +AH +L
Sbjct: 162 SIATGLAHLHMDIVGTRGKPAIAHRDL 188


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 132 HTGAIVYYQRGNF 94
           H GA+ Y+  GNF
Sbjct: 185 HDGALAYFGYGNF 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,403
Number of Sequences: 2352
Number of extensions: 7018
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19557855
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)