Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0983
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62717-1|AAB27090.1|  496|Drosophila melanogaster LCCH3 protein.       28   7.8  
L17436-1|AAA28559.1|  496|Drosophila melanogaster GABA receptor ...    28   7.8  
AY060660-1|AAL28208.1|  496|Drosophila melanogaster GH08705p pro...    28   7.8  
AE014298-2288|AAS65370.1|  496|Drosophila melanogaster CG17336-P...    28   7.8  
AE014298-2287|AAN09377.1|  496|Drosophila melanogaster CG17336-P...    28   7.8  
AE014298-2286|AAF48540.1|  496|Drosophila melanogaster CG17336-P...    28   7.8  

>S62717-1|AAB27090.1|  496|Drosophila melanogaster LCCH3 protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 178 LYLVMCFIEMFVFLSVSVASNYT 110
           +YLVMCF+ +F  L    A NYT
Sbjct: 321 IYLVMCFVFVFAALLEYAAVNYT 343


>L17436-1|AAA28559.1|  496|Drosophila melanogaster GABA receptor
           beta subunit protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 178 LYLVMCFIEMFVFLSVSVASNYT 110
           +YLVMCF+ +F  L    A NYT
Sbjct: 321 IYLVMCFVFVFAALLEYAAVNYT 343


>AY060660-1|AAL28208.1|  496|Drosophila melanogaster GH08705p
           protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 178 LYLVMCFIEMFVFLSVSVASNYT 110
           +YLVMCF+ +F  L    A NYT
Sbjct: 321 IYLVMCFVFVFAALLEYAAVNYT 343


>AE014298-2288|AAS65370.1|  496|Drosophila melanogaster CG17336-PC,
           isoform C protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 178 LYLVMCFIEMFVFLSVSVASNYT 110
           +YLVMCF+ +F  L    A NYT
Sbjct: 321 IYLVMCFVFVFAALLEYAAVNYT 343


>AE014298-2287|AAN09377.1|  496|Drosophila melanogaster CG17336-PB,
           isoform B protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 178 LYLVMCFIEMFVFLSVSVASNYT 110
           +YLVMCF+ +F  L    A NYT
Sbjct: 321 IYLVMCFVFVFAALLEYAAVNYT 343


>AE014298-2286|AAF48540.1|  496|Drosophila melanogaster CG17336-PA,
           isoform A protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 178 LYLVMCFIEMFVFLSVSVASNYT 110
           +YLVMCF+ +F  L    A NYT
Sbjct: 321 IYLVMCFVFVFAALLEYAAVNYT 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,160,478
Number of Sequences: 53049
Number of extensions: 251479
Number of successful extensions: 286
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)