Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0982
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   1.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.7  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 206 IHVFCFVNNYVHSST*NKNYKY 141
           +H+F  +  Y HSS   +N+ Y
Sbjct: 31  VHIFIIIALYAHSSYGRENFIY 52


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 217 YNKKYMFFVL*IIMCILVHKIRIINITVT*NLHH 116
           Y + Y  + L +I+CI   K R IN+ +T  L +
Sbjct: 153 YFQFYYTYFLCVIVCIFRGKYRNINLLLTEQLQN 186


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = -1

Query: 487 IPKHIILWS 461
           +P+H+I+WS
Sbjct: 412 LPEHVIMWS 420


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 277 IL*YFITFNFHLYIILKSK*INN 345
           +L +F+T+N  L I L+   +NN
Sbjct: 180 VLLHFLTYNLSLGIKLRYDDVNN 202


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 277 IL*YFITFNFHLYIILKSK*INN 345
           +L +F+T+N  L I L+   +NN
Sbjct: 180 VLLHFLTYNLSLGIKLRYDDVNN 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,666
Number of Sequences: 336
Number of extensions: 3036
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)