Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0982
         (589 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64846-2|AAG24112.1|  332|Caenorhabditis elegans Serpentine rece...    28   5.7  
U97593-2|AAY86241.1|  195|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>U64846-2|AAG24112.1|  332|Caenorhabditis elegans Serpentine
           receptor, class t protein35 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 125 VLCNSNIYNSYFMY*NAHNYLQNKKHV 205
           +LC S IY SYF++   H Y  N KH+
Sbjct: 155 LLCCSVIYGSYFLFTTPHVY--NSKHL 179


>U97593-2|AAY86241.1|  195|Caenorhabditis elegans Hypothetical
           protein C46G7.5 protein.
          Length = 195

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = -3

Query: 140 YCYIEPTSHFKNDVKSLIMSIYLIW 66
           Y Y+EP+S+FK+   SL +++ +++
Sbjct: 18  YVYVEPSSNFKSPPPSLFINVPILF 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,095,701
Number of Sequences: 27780
Number of extensions: 239132
Number of successful extensions: 380
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)