BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0982 (589 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 26 0.24 DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 26 0.24 DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 26 0.24 DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 26 0.24 DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 26 0.24 DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 26 0.24 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 24 0.96 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 1.7 EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9 EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9 EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9 EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9 EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9 EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.9 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.9 >DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 26.2 bits (55), Expect = 0.24 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -3 Query: 185 NNYVHSST*NKNYKYYCY 132 NNY +S+ N NYK CY Sbjct: 87 NNYNYSNYNNNNYKQLCY 104 >DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 26.2 bits (55), Expect = 0.24 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -3 Query: 185 NNYVHSST*NKNYKYYCY 132 NNY +S+ N NYK CY Sbjct: 87 NNYNYSNYNNNNYKQLCY 104 >DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 26.2 bits (55), Expect = 0.24 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -3 Query: 185 NNYVHSST*NKNYKYYCY 132 NNY +S+ N NYK CY Sbjct: 87 NNYNYSNYNNNNYKQLCY 104 >DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 26.2 bits (55), Expect = 0.24 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -3 Query: 185 NNYVHSST*NKNYKYYCY 132 NNY +S+ N NYK CY Sbjct: 87 NNYNYSNYNNNNYKQLCY 104 >DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 26.2 bits (55), Expect = 0.24 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -3 Query: 185 NNYVHSST*NKNYKYYCY 132 NNY +S+ N NYK CY Sbjct: 87 NNYNYSNYNNNNYKQLCY 104 >DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 26.2 bits (55), Expect = 0.24 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -3 Query: 185 NNYVHSST*NKNYKYYCY 132 NNY +S+ N NYK CY Sbjct: 87 NNYNYSNYNNNNYKQLCY 104 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 24.2 bits (50), Expect = 0.96 Identities = 8/28 (28%), Positives = 15/28 (53%) Frame = -3 Query: 146 KYYCYIEPTSHFKNDVKSLIMSIYLIWI 63 +Y P H+++ +K I SI+ W+ Sbjct: 132 RYLAIYHPLRHYRSGLKRAIRSIFGAWL 159 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 23.4 bits (48), Expect = 1.7 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +2 Query: 134 NSNIYNSYFMY*NAHNYLQNKKHVFFIIVKINK 232 N+N YN+ + N +NY N K +++ I+ I + Sbjct: 330 NNNNYNNNYNNYNNNNY-NNYKKLYYNIINIEQ 361 >EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 6 protein. Length = 461 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 135 TVIFIILILCTRMHIII 185 TV+ I+ILC HII+ Sbjct: 444 TVLATIVILCRAPHIIV 460 >EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 461 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 135 TVIFIILILCTRMHIII 185 TV+ I+ILC HII+ Sbjct: 444 TVLATIVILCRAPHIIV 460 >EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 461 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 135 TVIFIILILCTRMHIII 185 TV+ I+ILC HII+ Sbjct: 444 TVLATIVILCRAPHIIV 460 >EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 461 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 135 TVIFIILILCTRMHIII 185 TV+ I+ILC HII+ Sbjct: 444 TVLATIVILCRAPHIIV 460 >EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 461 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 135 TVIFIILILCTRMHIII 185 TV+ I+ILC HII+ Sbjct: 444 TVLATIVILCRAPHIIV 460 >EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 461 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 135 TVIFIILILCTRMHIII 185 TV+ I+ILC HII+ Sbjct: 444 TVLATIVILCRAPHIIV 460 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 135 TVIFIILILCTRMHIII 185 TV+ I+ILC HII+ Sbjct: 512 TVLATIVILCRAPHIIV 528 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 22.2 bits (45), Expect = 3.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 135 TVIFIILILCTRMHIII 185 TV+ I+ILC HII+ Sbjct: 512 TVLATIVILCRAPHIIV 528 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 155,056 Number of Sequences: 438 Number of extensions: 3700 Number of successful extensions: 16 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17115420 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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