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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0982
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    26   0.24 
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    26   0.24 
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    26   0.24 
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    26   0.24 
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    26   0.24 
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    26   0.24 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   0.96 
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   1.7  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    22   3.9  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    22   3.9  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    22   3.9  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    22   3.9  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    22   3.9  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    22   3.9  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   3.9  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   3.9  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 NNYVHSST*NKNYKYYCY 132
           NNY +S+  N NYK  CY
Sbjct: 87  NNYNYSNYNNNNYKQLCY 104


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 NNYVHSST*NKNYKYYCY 132
           NNY +S+  N NYK  CY
Sbjct: 87  NNYNYSNYNNNNYKQLCY 104


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 NNYVHSST*NKNYKYYCY 132
           NNY +S+  N NYK  CY
Sbjct: 87  NNYNYSNYNNNNYKQLCY 104


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 NNYVHSST*NKNYKYYCY 132
           NNY +S+  N NYK  CY
Sbjct: 87  NNYNYSNYNNNNYKQLCY 104


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 NNYVHSST*NKNYKYYCY 132
           NNY +S+  N NYK  CY
Sbjct: 87  NNYNYSNYNNNNYKQLCY 104


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 NNYVHSST*NKNYKYYCY 132
           NNY +S+  N NYK  CY
Sbjct: 87  NNYNYSNYNNNNYKQLCY 104


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 146 KYYCYIEPTSHFKNDVKSLIMSIYLIWI 63
           +Y     P  H+++ +K  I SI+  W+
Sbjct: 132 RYLAIYHPLRHYRSGLKRAIRSIFGAWL 159


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 134 NSNIYNSYFMY*NAHNYLQNKKHVFFIIVKINK 232
           N+N YN+ +   N +NY  N K +++ I+ I +
Sbjct: 330 NNNNYNNNYNNYNNNNY-NNYKKLYYNIINIEQ 361


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 135 TVIFIILILCTRMHIII 185
           TV+  I+ILC   HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 135 TVIFIILILCTRMHIII 185
           TV+  I+ILC   HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 135 TVIFIILILCTRMHIII 185
           TV+  I+ILC   HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 135 TVIFIILILCTRMHIII 185
           TV+  I+ILC   HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 135 TVIFIILILCTRMHIII 185
           TV+  I+ILC   HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 135 TVIFIILILCTRMHIII 185
           TV+  I+ILC   HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 135 TVIFIILILCTRMHIII 185
           TV+  I+ILC   HII+
Sbjct: 512 TVLATIVILCRAPHIIV 528


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 135 TVIFIILILCTRMHIII 185
           TV+  I+ILC   HII+
Sbjct: 512 TVLATIVILCRAPHIIV 528


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,056
Number of Sequences: 438
Number of extensions: 3700
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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