Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0982
(589 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 26 0.24
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 26 0.24
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 26 0.24
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 26 0.24
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 26 0.24
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 26 0.24
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 24 0.96
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 1.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.9
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.24
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 185 NNYVHSST*NKNYKYYCY 132
NNY +S+ N NYK CY
Sbjct: 87 NNYNYSNYNNNNYKQLCY 104
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.24
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 185 NNYVHSST*NKNYKYYCY 132
NNY +S+ N NYK CY
Sbjct: 87 NNYNYSNYNNNNYKQLCY 104
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.24
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 185 NNYVHSST*NKNYKYYCY 132
NNY +S+ N NYK CY
Sbjct: 87 NNYNYSNYNNNNYKQLCY 104
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.24
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 185 NNYVHSST*NKNYKYYCY 132
NNY +S+ N NYK CY
Sbjct: 87 NNYNYSNYNNNNYKQLCY 104
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.24
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 185 NNYVHSST*NKNYKYYCY 132
NNY +S+ N NYK CY
Sbjct: 87 NNYNYSNYNNNNYKQLCY 104
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.24
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 185 NNYVHSST*NKNYKYYCY 132
NNY +S+ N NYK CY
Sbjct: 87 NNYNYSNYNNNNYKQLCY 104
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 24.2 bits (50), Expect = 0.96
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -3
Query: 146 KYYCYIEPTSHFKNDVKSLIMSIYLIWI 63
+Y P H+++ +K I SI+ W+
Sbjct: 132 RYLAIYHPLRHYRSGLKRAIRSIFGAWL 159
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 134 NSNIYNSYFMY*NAHNYLQNKKHVFFIIVKINK 232
N+N YN+ + N +NY N K +++ I+ I +
Sbjct: 330 NNNNYNNNYNNYNNNNY-NNYKKLYYNIINIEQ 361
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 TVIFIILILCTRMHIII 185
TV+ I+ILC HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 TVIFIILILCTRMHIII 185
TV+ I+ILC HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 TVIFIILILCTRMHIII 185
TV+ I+ILC HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 TVIFIILILCTRMHIII 185
TV+ I+ILC HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 TVIFIILILCTRMHIII 185
TV+ I+ILC HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 TVIFIILILCTRMHIII 185
TV+ I+ILC HII+
Sbjct: 444 TVLATIVILCRAPHIIV 460
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 TVIFIILILCTRMHIII 185
TV+ I+ILC HII+
Sbjct: 512 TVLATIVILCRAPHIIV 528
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 TVIFIILILCTRMHIII 185
TV+ I+ILC HII+
Sbjct: 512 TVLATIVILCRAPHIIV 528
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,056
Number of Sequences: 438
Number of extensions: 3700
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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