Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0981
         (597 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33)          56   2e-08
SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.18 
SB_51628| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.00061)       33   0.23 
SB_51627| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.017)         31   0.53 
SB_28368| Best HMM Match : Pentaxin (HMM E-Value=9.5e-11)              31   0.71 
SB_31317| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_35925| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  
SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35)                    27   8.7  

>SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33)
          Length = 666

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +1

Query: 421 PLIFIGGVPRSGTTLMRAMLDAHPDVRCGR 510
           PLIF+GG PRSGTTLMR MLD  PD+RCG+
Sbjct: 398 PLIFVGGFPRSGTTLMRVMLDTLPDIRCGQ 427


>SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 980

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -1

Query: 525 APRASPAAAHVRMCVQHGPHQRGAGARYAADEDERQVASGD 403
           +P  SPA A      Q   HQR +G  ++ DE E+  ASGD
Sbjct: 713 SPEKSPAGADEETADQEQAHQRDSGVGFSMDEGEKS-ASGD 752


>SB_51628| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.00061)
          Length = 351

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = +1

Query: 424 LIFIGGVPRSGTTLMRAMLDAHPD 495
           LIFIG  PRSG TL+ +++DAHP+
Sbjct: 95  LIFIG-YPRSGHTLVGSLIDAHPN 117


>SB_51627| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.017)
          Length = 340

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +1

Query: 424 LIFIGGVPRSGTTLMRAMLDAHPD 495
           L+FIG  PRSG TL+ +++DAHP+
Sbjct: 68  LMFIG-YPRSGHTLVGSLIDAHPN 90


>SB_28368| Best HMM Match : Pentaxin (HMM E-Value=9.5e-11)
          Length = 1160

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +1

Query: 424 LIFIGGVPRSGTTLMRAMLDAHP 492
           ++FIG  PRSG TL+ +++DAHP
Sbjct: 873 VVFIG-YPRSGHTLVSSLIDAHP 894


>SB_31317| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1077

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +1

Query: 376 PRSSDRQAPVAGRDLPLIFIGGVPRSGTTLMRAMLDAHPDVRC 504
           P   D Q P  GRDL + F+G  PR G      + D     RC
Sbjct: 563 PGGEDSQYP-EGRDLAVRFVGKCPRHGDESSIVVRDREEPARC 604


>SB_35925| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 178

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 479 SMARISVVPERGTPPMKMSGKSRP 408
           SM R+++ P R  P ++MSGK  P
Sbjct: 123 SMERMTIYPSRSRPWIRMSGKGSP 146


>SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35)
          Length = 442

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 567 SESGPSARASAGCEAPRASPAAA 499
           ++SGP A A    EAP A P AA
Sbjct: 207 ADSGPPAEAEPEAEAPAAGPTAA 229


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,210,600
Number of Sequences: 59808
Number of extensions: 242561
Number of successful extensions: 631
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)