Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0981
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical...    64   7e-11
AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotei...    64   7e-11
U00051-6|AAK70644.1|  259|Caenorhabditis elegans Hypothetical pr...    34   0.088

>AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical
           protein Y111B2A.15 protein.
          Length = 380

 Score = 64.1 bits (149), Expect = 7e-11
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 412 RDLPLIFIGGVPRSGTTLMRAMLDAHPDVRCG 507
           R  P IFIGGVPRSGTTLMRAMLDAHP+VRCG
Sbjct: 67  RTSPFIFIGGVPRSGTTLMRAMLDAHPEVRCG 98



 Score = 35.1 bits (77), Expect = 0.038
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 510 ETRVVPRILQMREHWARSQKE 572
           ETRV+PRIL +R  W +S+KE
Sbjct: 100 ETRVIPRILNLRSQWKKSEKE 120


>AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotein
           sulfotransferase-A protein.
          Length = 380

 Score = 64.1 bits (149), Expect = 7e-11
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 412 RDLPLIFIGGVPRSGTTLMRAMLDAHPDVRCG 507
           R  P IFIGGVPRSGTTLMRAMLDAHP+VRCG
Sbjct: 67  RTSPFIFIGGVPRSGTTLMRAMLDAHPEVRCG 98



 Score = 35.1 bits (77), Expect = 0.038
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 510 ETRVVPRILQMREHWARSQKE 572
           ETRV+PRIL +R  W +S+KE
Sbjct: 100 ETRVIPRILNLRSQWKKSEKE 120


>U00051-6|AAK70644.1|  259|Caenorhabditis elegans Hypothetical
           protein F42G9.8 protein.
          Length = 259

 Score = 33.9 bits (74), Expect = 0.088
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +1

Query: 466 MRAMLDAHPDVRCG 507
           MRA+LDAHPDVRCG
Sbjct: 1   MRAILDAHPDVRCG 14


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,572,240
Number of Sequences: 27780
Number of extensions: 180657
Number of successful extensions: 495
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)