Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0979
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.16 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   4.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = -2

Query: 441 KEREFEWLSETGSSLIEVAKKEEK---SYSKNTSKQLKDMEERWRKLQ 307
           ++R  E L+E  SSLI++ + EEK   SYS N +    D    + K++
Sbjct: 30  EKRSSENLTEEKSSLIDLTESEEKSGGSYSSNKNVSRADHSPVFGKVE 77


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +2

Query: 380 FFATSIRELPVSESHSNSRSFIAVSA*TSAFSLLIKSWGSKAV 508
           F    + +L  S    NSR F+       A   L K WG+ A+
Sbjct: 68  FLLQCLEDLDRSLRKLNSRLFVIRGQPADALPKLFKEWGTTAL 110


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 221 YSDFCKPLFELFIVSSNSVIFTILDLPVSWSFRHLSSMSFNCFDVFLL 364
           YS +C  +    IV+S   +  I+D  +S+    L  ++F C  +  +
Sbjct: 281 YSMYCLLILLTTIVASYGSVTEIMDQGISFKEAGLFMIAFYCMTLLYI 328


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 221 YSDFCKPLFELFIVSSNSVIFTILDLPVSWSFRHLSSMSFNCFDVFLL 364
           YS +C  +    IV+S   +  I+D  +S+    L  ++F C  +  +
Sbjct: 281 YSMYCLLILLTTIVASYGSVTEIMDQGISFKEAGLFMIAFYCMTLLYI 328


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 92  LSTFGFNFFMCIVSFFEFLI 151
           L T   +FF+C++ F  F++
Sbjct: 292 LGTVVLSFFLCLIPFRVFIL 311


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = -1

Query: 151 DEKFKERDDTHKEIEAESGEVCETLNLCDLVFNDPDVL 38
           D +F +       +   SGE      LC   F+D   L
Sbjct: 56  DRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTL 93


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 358 KHVKTVEGHGRK 323
           KHVKT  G+G+K
Sbjct: 392 KHVKTHNGNGKK 403


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = -1

Query: 151 DEKFKERDDTHKEIEAESGEVCETLNLCDLVFNDPDVL 38
           D +F +       +   SGE      LC   F+D   L
Sbjct: 312 DRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTL 349


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 420  LSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQ 307
            L+ T  +L    KKEE S +    KQ  ++ ++ +KLQ
Sbjct: 1357 LASTELNLCCTKKKEELSPNALLDKQAVEIVKQLQKLQ 1394


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 420  LSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQ 307
            L+ T  +L    KKEE S +    KQ  ++ ++ +KLQ
Sbjct: 1357 LASTELNLCCTKKKEELSPNALLDKQAVEIVKQLQKLQ 1394


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 420  LSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQ 307
            L+ T  +L    KKEE S +    KQ  ++ ++ +KLQ
Sbjct: 1357 LASTELNLCCTKKKEELSPNALLDKQAVEIVKQLQKLQ 1394


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 420  LSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQ 307
            L+ T  +L    KKEE S +    KQ  ++ ++ +KLQ
Sbjct: 1357 LASTELNLCCTKKKEELSPNALLDKQAVEIVKQLQKLQ 1394


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,588
Number of Sequences: 336
Number of extensions: 2447
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)