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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0979
         (598 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0267 - 1972988-1973148,1973275-1973403,1973881-1974024,197...    30   1.6  
03_06_0722 - 35751490-35754357                                         30   1.6  
02_05_0939 + 32914936-32915055,32916674-32916823,32917160-329173...    29   2.1  
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045           29   3.7  
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259...    29   3.7  
11_01_0389 - 2937242-2939476,2939556-2939666,2941254-2941450,294...    28   4.9  
05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335           28   4.9  
11_06_0717 - 26575009-26575152,26576461-26577978                       28   6.5  
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938...    28   6.5  
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039...    27   8.6  
02_04_0149 + 20201674-20201891,20202009-20202111,20202658-202027...    27   8.6  

>06_01_0267 -
           1972988-1973148,1973275-1973403,1973881-1974024,
           1974368-1974493,1974595-1974720,1975149-1975241,
           1975465-1975606,1976747-1976878,1976943-1977080,
           1977431-1977523,1978186-1978389,1978568-1978656,
           1978839-1978988,1979088-1979253,1979355-1979576,
           1979687-1979872,1980289-1980411,1980511-1980611,
           1982005-1982155
          Length = 891

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/52 (23%), Positives = 29/52 (55%)
 Frame = -2

Query: 384 KKEEKSYSKNTSKQLKDMEERWRKLQETGRSRIVKITELLETINSSKRGLQK 229
           +K  +  +++ +  LK+    W+K++    + +VK+ ++L+T  S K  L +
Sbjct: 516 EKVLRQSAEDEANDLKNQVLHWKKMEAAATAEVVKLRKMLDTEASQKEKLDE 567



 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/73 (26%), Positives = 33/73 (45%)
 Frame = -2

Query: 489 DLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKL 310
           D I R+ A+ Q      ERE++   E           E+  Y +     +K +EE+W K+
Sbjct: 439 DEIERITAEAQLRVTEAEREYKISLEN----------EKAKYHQEYLDSIKILEEKW-KI 487

Query: 309 QETGRSRIVKITE 271
            +    +++K TE
Sbjct: 488 HQQSPKKLIKETE 500


>03_06_0722 - 35751490-35754357
          Length = 955

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
 Frame = -2

Query: 408 GSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRI---VK----ITELLETINS 250
           G+S+      E  S ++      K ++E  RKL+ET ++ +   VK    +TE L  I+S
Sbjct: 392 GTSIFASGSAEFLSIAQQADVASKALQENIRKLKETHKTTVDALVKTDTHLTEALSEISS 451

Query: 249 SKRGLQKSE 223
            + GLQ +E
Sbjct: 452 LESGLQDAE 460


>02_05_0939 + 32914936-32915055,32916674-32916823,32917160-32917305,
            32917396-32917552,32917695-32917753,32918180-32918291,
            32918901-32919050,32919180-32919316,32919977-32920123,
            32920197-32920298,32920674-32920731,32920840-32920941,
            32921905-32921942,32922031-32922157,32922228-32922401,
            32922542-32922628,32923838-32923947,32924654-32924714,
            32925338-32925515,32925628-32925833,32926108-32926227,
            32927202-32927423,32927708-32927847,32927976-32928087,
            32928254-32928304,32928384-32928473,32928630-32928800,
            32928897-32929049,32929860-32930036,32930131-32930268,
            32930363-32930433,32930837-32930936,32931156-32931212,
            32931301-32931357,32931451-32931531,32931614-32931696,
            32931831-32931966
          Length = 1459

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = -2

Query: 474  LNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGR 295
            + A+ + E +  +   E LS+  SSL E      +  S +T K+LKD+E +   LQ+   
Sbjct: 909  MTAEAEKENSNLKNLVESLSKRNSSL-EYELTSARKGSDDTMKKLKDVEGKCNHLQQNLD 967

Query: 294  SRIVKITEL 268
                K+T L
Sbjct: 968  KLQEKLTNL 976


>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
          Length = 1294

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 21/73 (28%), Positives = 29/73 (39%)
 Frame = -1

Query: 232  EIRIKLHVIESKLTTTVILEYLTTKSVDEKFKERDDTHKEIEAESGEVCETLNLCDLVFN 53
            E    L    S+L   V+ E     S++E    + D  K I       CE L    LVF 
Sbjct: 930  ECNENLETKSSRLLVVVVEECKCLNSLEESLLVQGDYIKSIHVLRISDCEDLEAAPLVFE 989

Query: 52   DPDVLKGNFDLRN 14
              + L+   D+RN
Sbjct: 990  QMNELR-ELDIRN 1001


>02_04_0067 -
           19425019-19425288,19425393-19425647,19425766-19425937,
           19426069-19426302,19426523-19426656,19427663-19427746,
           19428355-19428645,19428788-19429120,19429317-19429390,
           19429464-19429644,19429993-19430096,19430232-19430392,
           19430727-19431040,19431583-19431864,19432431-19432732,
           19433176-19433266,19433368-19433421,19438917-19438993,
           19439081-19439240,19439410-19439494,19439574-19440130
          Length = 1404

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 423 WLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQ 307
           W S TG+S   +++ +  ++ +      KDM+ R  KLQ
Sbjct: 741 WTSATGTSRAIISRDKFSTFDRRGKDMSKDMDNRMPKLQ 779


>11_01_0389 -
           2937242-2939476,2939556-2939666,2941254-2941450,
           2941543-2941633
          Length = 877

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = -2

Query: 510 HTALDPHDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDM 331
           H     HD + + N DV   +   ++   +LSE  +   +  K E K   +NT++  K  
Sbjct: 366 HPNSPKHDTVDKANQDVDYGSVGIQKAAAFLSEDRNGATQGEKSEIKDPPENTAEHTKMF 425

Query: 330 EE 325
           E+
Sbjct: 426 EQ 427


>05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335
          Length = 377

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/57 (22%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 393 EVAKKEEKSYSKNTSKQL-KDMEERWRKLQETGRSRIVKITELLETINSSKRGLQKS 226
           E+ K+ E+++ ++    + K +EE+W ++++   + +   ++  ET N SK+   K+
Sbjct: 149 ELEKEFERAFEQSDIANVTKTLEEKWAEMKKPAPAEVKGTSQEKETANPSKKETGKT 205


>11_06_0717 - 26575009-26575152,26576461-26577978
          Length = 553

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 393 EVAKKEEKSYSKNTSKQLKDMEERWRK-LQET--GRSRIVKITELL--ETINSSKRGLQK 229
           EV KK E     +  +  KD+ E W K ++ET  G+    ++ E L    +   +R L K
Sbjct: 316 EVLKKHEHDEEPDQKQMAKDLMEEWDKFIKETPAGKDAAERLKEKLPKHHVEDMRRSLTK 375

Query: 228 SE 223
            E
Sbjct: 376 EE 377


>10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,
            9387180-9387325,9387416-9387572,9387720-9387778,
            9388204-9388360,9389001-9389150,9389280-9389416,
            9390071-9390217,9390292-9390393,9390742-9390799,
            9391997-9392034,9392124-9392250,9392320-9392493,
            9393125-9393256,9393940-9394049,9394752-9394812,
            9395036-9395213,9395326-9395531,9395796-9395915,
            9396496-9396594,9396983-9397204,9397482-9397621,
            9397741-9397852,9398021-9398071,9398151-9398240,
            9398397-9398567,9398663-9398815,9399774-9399950,
            9400045-9400182,9400295-9400365,9400739-9400838,
            9401324-9401380,9401469-9401525,9401619-9401699,
            9401782-9401864,9401975-9402110
          Length = 1632

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = -2

Query: 474  LNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGR 295
            + A+ + E +  +   E LS+  SSL E      +  S  T K+LKD+E +   LQ+   
Sbjct: 1082 MTAEAERENSNLKNLVESLSKNNSSL-EYELTSARKGSDATMKKLKDVEGKCNHLQQNLD 1140

Query: 294  SRIVKITEL 268
                K+T +
Sbjct: 1141 KLQEKLTNM 1149


>04_04_1143 +
           31202901-31203034,31203312-31203345,31203913-31203985,
           31204090-31204187,31204356-31204448,31205081-31205154,
           31205680-31205768,31205859-31205935,31206016-31206090,
           31206438-31206485,31206571-31206654,31206734-31206821,
           31206896-31206974,31207072-31207162,31207724-31207802,
           31208219-31208334,31208430-31208488,31210292-31210342,
           31211418-31211444,31211725-31211809,31211952-31212024,
           31212154-31212251,31212385-31212477,31212972-31213045,
           31213258-31213296,31213410-31213498,31213583-31213707,
           31213750-31213824,31214225-31214272,31214359-31214442,
           31214574-31214661,31214762-31214840,31214930-31215020,
           31215113-31215191,31215485-31215600,31215910-31215987
          Length = 960

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 483 IRRLNADVQAETAMKEREFEWLSETGSSLI 394
           +RRLN D++A T++   E EW  +T   L+
Sbjct: 463 LRRLNVDIEATTSL---ELEWRLQTSPQLL 489


>02_04_0149 +
           20201674-20201891,20202009-20202111,20202658-20202765,
           20202882-20202991,20203170-20203277,20203667-20203733,
           20204044-20204078,20204456-20204501,20204692-20204844
          Length = 315

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +2

Query: 218 FYSDFCKPLFELFIV--SSNSVIF--TILDLPVSWSFRHLSSMSFNCF 349
           F  D C    + F+V  S +  IF   ++D PV  SFR  SS+ F CF
Sbjct: 267 FKMDCCLTNDDAFVVGGSEDGYIFFWELVDAPVVSSFRAHSSVVFPCF 314


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,634,655
Number of Sequences: 37544
Number of extensions: 244150
Number of successful extensions: 837
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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