Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0979
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 32 0.31
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 31 0.93
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 31 0.93
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_7872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23) 29 3.8
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 29 3.8
SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_23270| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 29 3.8
SB_7706| Best HMM Match : Spectrin (HMM E-Value=0) 29 3.8
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_58556| Best HMM Match : 4F5 (HMM E-Value=5.7) 28 5.0
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 28 5.0
SB_30875| Best HMM Match : Rubredoxin (HMM E-Value=1.6) 28 5.0
SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3) 28 5.0
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 28 5.0
SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09) 28 5.0
SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_39149| Best HMM Match : 4F5 (HMM E-Value=1.2) 28 6.6
SB_11517| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_20144| Best HMM Match : E-MAP-115 (HMM E-Value=0.41) 28 6.6
SB_53232| Best HMM Match : OAR (HMM E-Value=0.92) 27 8.7
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 27 8.7
SB_38737| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 27 8.7
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 27 8.7
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 27 8.7
SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39) 27 8.7
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = -2
Query: 498 DPHDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERW 319
+ ++ R+ N D++ + +ERE + +S T + L KK E + N +QL + ++
Sbjct: 1106 EAREVARKENTDLKRQLKDEEREKDAVSHTANELRGKVKKSE-AEKTNLRRQLDEASQKI 1164
Query: 318 RKLQET 301
L+ET
Sbjct: 1165 ASLEET 1170
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 450 TAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRIV---K 280
+A+KERE W + + + E K T K ++ W K+QETG + +
Sbjct: 436 SAIKERETSWKKQK-AEIEEHYNKIINDLQNRTKKTQNLADKAWEKVQETGHVKETLEQR 494
Query: 279 ITELLETINSSKR 241
T+LL+ + R
Sbjct: 495 NTKLLQAVEKYSR 507
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -2
Query: 468 ADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGR-- 295
A ++ E + E E ++ + L E+ +KE+ N ++ME+ +KLQ+ +
Sbjct: 1551 AKIEKELTEAKAEKEMTEKSKAELEELQQKEKAGLGSNQFVAYREMEQLQQKLQQQQKQI 1610
Query: 294 -SRIVKITELLETINSSKR 241
+ +++T L T +S+ R
Sbjct: 1611 QQQQMRLTSLTTTASSTTR 1629
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = -2
Query: 492 HDLIRRLNADVQ-AETAMKERE--FEWLSETGSSLIEVAKK-EEKSYSKNTSKQLKDMEE 325
+D+++R V+ A K+ E FE +S G+ ++E + EEK K +L DME+
Sbjct: 1941 YDVVKRQKHKVEEARDDCKQLEPVFEKVSSCGNDVLESLEAGEEKDDLKG---KLDDMEQ 1997
Query: 324 RWRKLQE 304
RW+ ++E
Sbjct: 1998 RWKSVKE 2004
>SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = -2
Query: 471 NADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSK---NTSKQLKDMEERWRKLQ 307
++DV AE A KE++ +E G +L+E ++ + Y K S++++ +E+ +L+
Sbjct: 64 DSDVYAELAQKEKDLLLAAELGKALLEKNEELSQKYEKLQEEFSQRVEQLEQEKHELK 121
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/69 (17%), Positives = 35/69 (50%)
Frame = -2
Query: 429 FEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRIVKITELLETINS 250
F W + +E K+E++ ++ + +++ ++L++ S+ ++ + LE +
Sbjct: 642 FRWRHQARVERMEEMKREKEKLESKITENKRQLDQLRKQLEQVDLSKKHELLKKLEDVEK 701
Query: 249 SKRGLQKSE 223
++ L+K E
Sbjct: 702 EQKKLRKEE 710
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/95 (23%), Positives = 42/95 (44%)
Frame = -2
Query: 507 TALDPHDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDME 328
T + L L D+Q A K L+E + +K ++ ++ ++ + E
Sbjct: 325 TEEEKEGLASMLQGDLQRIMAEKHDAESRLTELQHKNEQEQEKMKELIQQHNNRLKEKQE 384
Query: 327 ERWRKLQETGRSRIVKITELLETINSSKRGLQKSE 223
+ + L + ++ KITEL ETI ++ +SE
Sbjct: 385 DHQKNLAKLKKAHQNKITELTETIKKAEHKAVESE 419
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = -2
Query: 399 LIEVAKKEEKSYSKNTSKQLKDM----EERWRKLQETGRSRIVKITELLET-INSSKRGL 235
L+E + +SY K KQL D EE+ +LQE +S + K+ LE+ IN ++ +
Sbjct: 763 LLEDRMSQHESYYK---KQLDDAANVHEEKLLRLQERSKSELEKLRAHLESDINEKEKEI 819
Query: 234 QKSE 223
++ +
Sbjct: 820 ERKD 823
>SB_7872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 327 ERWRKLQETGRSRIVKITELLETINSSKRG 238
E ++ LQ+TG++ ++IT T+N+S RG
Sbjct: 72 EAYKVLQKTGKTDTLEITVQTHTVNNSARG 101
>SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)
Length = 1178
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/98 (21%), Positives = 49/98 (50%)
Frame = -2
Query: 507 TALDPHDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDME 328
T + H+ R++++ + + +KE++ + ++E S + + + + Y K + ++ + E
Sbjct: 216 TTIKKHE--RKISSMTRESSTLKEQKDKQINELKSLVEQSGENAQHDYEKKLNDKIAEFE 273
Query: 327 ERWRKLQETGRSRIVKITELLETINSSKRGLQKSE*NY 214
+ ++Q + I ELL+ N + LQK E Y
Sbjct: 274 QEKFEMQ---KQHTNNIQELLDETN---QRLQKMETEY 305
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/85 (21%), Positives = 39/85 (45%)
Frame = -2
Query: 492 HDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRK 313
++L+R+ ADVQ E + L E+ +++E + D++ER +
Sbjct: 872 NELVRKQQADVQRLNKEYETQMMALKLQLQRTAEIRERQEAEFELKLDDLRADIQERDSQ 931
Query: 312 LQETGRSRIVKITELLETINSSKRG 238
++E S + ++TE + + +G
Sbjct: 932 IKELD-SEMAEVTENIAKLQHELQG 955
>SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/72 (23%), Positives = 38/72 (52%)
Frame = -2
Query: 456 AETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRIVKI 277
AE+ + +W S+ +KKE K +++ K ++ +LQ+T ++ +V
Sbjct: 963 AESKKSKEGSKWFSKKSKETKNGSKKESKESKRDSKKGHDQIDAVDVQLQDTPKNGLV-- 1020
Query: 276 TELLETINSSKR 241
++++ET +SK+
Sbjct: 1021 SDVVETKKNSKK 1032
>SB_23270| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 143
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 495 PHDL-IRRLNADVQAETAMKEREFEWLSETGSSLI--EVAKKEEKSYSKNTSKQLKDMEE 325
PHD+ ++ +A +++ + L E+G + + KKE ++S+N +Q+K +
Sbjct: 32 PHDIDYDKIRYQEKAREKQRQKRIQALVESGGEGVAKKKRKKETVAWSRNKERQIKREKR 91
Query: 324 RWRK 313
R R+
Sbjct: 92 RARR 95
>SB_7706| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 686
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 208 IESKLTTTVILEYLTTKSVDEKFKERDDTHKEIEAESGEVCETLNL 71
I K+ T + Y ++ KF++ E+EA V ET+NL
Sbjct: 106 ISEKMQTVLDESYKDPTNLQSKFQKHQAFEAEVEANKERVLETVNL 151
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = -2
Query: 348 KQLKDMEERWRKLQETGRSRIVKITELLETINSSKRGLQK 229
K+L+++E+ +L +T + ++ +L+ T+NSSK Q+
Sbjct: 2883 KKLEELEDEILRLLQTAQGSLLDDEQLVNTLNSSKTTSQE 2922
>SB_58556| Best HMM Match : 4F5 (HMM E-Value=5.7)
Length = 215
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = -2
Query: 453 ETAMKEREFEWLSET---GS-SLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRI 286
E A +ERE + L ET GS +E K + + K ++L D ++R + R
Sbjct: 77 EIAAREREADLLRETEADGSKKKVEQEKAKGEEIRKRAMEKLGDTKKREESASKKSRRSG 136
Query: 285 VKITELLETINSSKRGLQKSE 223
+ E L+ N R +++ E
Sbjct: 137 SMMVEYLKEKNEKDRAIKERE 157
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = -1
Query: 256 KQLEERLTEI-RIKLHVIESKLTTTVILEYL--TTKSVDEKFKERDDTHKEIEAESGEVC 86
K+++E T++ K V E+K + + T VDE KE +T KEI+ +V
Sbjct: 1312 KEVDETKTKVDETKKEVQETKKDVQETKKEVQETKTKVDETNKEVQETKKEIQETKKDVH 1371
Query: 85 ETLNLCDLVFNDPDVLKGNFDLRNLRT 5
E + D LK F RN+ +
Sbjct: 1372 EVKGKVSEMAVDLASLKEEFSSRNVNS 1398
>SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = -1
Query: 256 KQLEERLTEIRI---KLHV-IESKLTTTVILEYLTTKSVDEKFKERDDTHKEIEAESGEV 89
+QL++ IRI K+ V I SKLT+T L+ KS+ E+F ++KE+ A +
Sbjct: 10 QQLKKDFEVIRIWITKIEVLISSKLTSTETLDERELKSLTEEF----SSNKELLASIEKT 65
Query: 88 CETLNLCDLVFNDPDVLKGNFDLRNLRT 5
C L+ N +L+ DL + +T
Sbjct: 66 CRELDQATQGTNYAKLLR---DLEHFKT 90
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -2
Query: 441 KEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRIVKITEL-L 265
KE E E +ET E K+EEK K T K+ EE+W++ + + K E
Sbjct: 15 KEGETEKEAETKKEA-ETEKEEEKETKKKTEKE----EEKWKQEETEKEAETEKEAETEK 69
Query: 264 ETINSSKRGLQKSE 223
E K+ +K E
Sbjct: 70 EAEKEKKKKTEKEE 83
>SB_30875| Best HMM Match : Rubredoxin (HMM E-Value=1.6)
Length = 1130
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 468 ADVQAETAMKEREFEWLSETGSSLIEV--AKKEEKSYSK-NTSKQLKDMEE 325
ADV+ T E EFE E+ SL + AKK+E +Y+K + SK+ + E
Sbjct: 938 ADVRRRTKSDEMEFETPPESPQSLDDQGGAKKKEHTYAKVDKSKKTRHSME 988
>SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3)
Length = 471
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/32 (34%), Positives = 23/32 (71%)
Frame = -2
Query: 420 LSETGSSLIEVAKKEEKSYSKNTSKQLKDMEE 325
++ETG+SL++ ++K+ +K ++LKD+ E
Sbjct: 323 IAETGTSLLKCSEKKILKEAKRQKRKLKDINE 354
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 459 QAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGR 295
+ E +E E + E L+E +KE++ K ++ K+ E+R RK E R
Sbjct: 389 EEEKRKREGEVKKRKEEEERLVEARRKEQEEKRKLEEQKRKEEEDRRRKEAEEKR 443
>SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09)
Length = 702
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = -2
Query: 498 DPHDLIRRLNADVQAETAMKEREFEWLSETGSSLI-EVAKKEE--KSYSKNT 352
D +LI RL ADVQ E + E + L ETG +L ++ +K E ++Y+ T
Sbjct: 203 DTLELIERL-ADVQQEKWLLEEKVRHLEETGGALADDLVQKSEVIQAYAMET 253
>SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -2
Query: 441 KEREFEWLSETGSSLIEVAKKEE--KSYSKNTSKQLKDMEERWRKLQETGRSRIVKITEL 268
KE+E L E+ L E +++E + K ++ D+EE++ LQE + K+ ++
Sbjct: 402 KEQEL-LLEESAKELAERRERQENLQKLIKEKEQERIDIEEKYASLQEEASGKTKKLKKV 460
Query: 267 LETINSSK 244
+ S+K
Sbjct: 461 WTMLMSAK 468
>SB_39149| Best HMM Match : 4F5 (HMM E-Value=1.2)
Length = 148
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -2
Query: 453 ETAMKEREFEWLSET---GS-SLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRI 286
E A +ERE + L ET GS +E K + K ++L D ++R + R
Sbjct: 10 EIAAREREADLLRETEADGSKKKVEQEKARGEEIRKRAMEKLGDTKKREESASKKSRRSG 69
Query: 285 VKITELLETINSSKRGLQKSE 223
+ E L+ N R +++ E
Sbjct: 70 SMMVEYLKEKNEKDRAIKERE 90
>SB_11517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 459 QAETAMKEREFEWLSETGSSLIEVAK--KEEKSYSKNTSKQLKDMEERWRKLQE 304
+ E +KE E EWL E + + + K+EK + +K+ +D+ R + +E
Sbjct: 187 EEERRLKELEAEWLKEQNAMRAQEEEFLKQEKLRKQEAAKRARDVSIRLKNEKE 240
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 387 AKKEEKSYSKNTS--KQLKDMEERWRKLQETGRSRIVKITELLETI 256
A KE S + S +LKD+ +RWR + + R K+ +LL +
Sbjct: 722 AAKEATSRADQESLENRLKDIVQRWRNINKLAGDRSKKLEKLLPVV 767
>SB_20144| Best HMM Match : E-MAP-115 (HMM E-Value=0.41)
Length = 416
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 459 QAETAMKEREFEWLSETGSSLIEVAK--KEEKSYSKNTSKQLKDMEERWRKLQE 304
+ E +KE E EWL E + + + K+EK + +K+ +D+ R + +E
Sbjct: 147 EEERRLKELEAEWLKEQNAMRAQEEEFLKQEKLRKQEAAKRARDVSIRLKNEKE 200
>SB_53232| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 806
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -2
Query: 483 IRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSY-SKNTSKQLKDMEERWRKLQ 307
IR+L ++ E + ++ L + E+ + ++K Y KN +K++ + ER + +
Sbjct: 14 IRKLTLNIHMENPVSRKQAAALKKK-----EIKRAKDKDYYEKNRNKKIAQVIERRKARR 68
Query: 306 ETGRSRIVKITELLETINSSKRGLQKS 226
E + + TE+ + + +R Q++
Sbjct: 69 EETKGKSRTRTEIKKAASKKRRKEQRA 95
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -2
Query: 477 RLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQE 304
R NAD + +K +EF+ E+ I V KE+K K+L +ME ++R ++E
Sbjct: 344 RDNAD-EVSLWLKGQEFKIKPESEEEAI-VGLKEQKKDLMMLEKELAEMEPKYRAVKE 399
>SB_38737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -2
Query: 459 QAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRIVK 280
Q E + R + L+E S ++E KK+ YSK + +M ++ + +S+I
Sbjct: 28 QMEKLRRARINDSLNELKSLVLEAMKKDASRYSKMEKADILEMTVKYLRSAPEKQSKISD 87
Query: 279 ITEL 268
T L
Sbjct: 88 PTSL 91
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -2
Query: 402 SLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQE--TGRSRIVKITELLETINSSKRGLQK 229
SL++ K S + K+L ++ +W +LQ R R ++ LL S R QK
Sbjct: 144 SLLDYLDKTSSDSSPSKRKRLSEVNRQWERLQPLLRSRERHLQTLGLLPPTQKSPRTKQK 203
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 393 EVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRIVKITELLETINSSKRGLQKSE 223
E ++EE+ + +Q EER RKLQE R + E + ++ ++ E
Sbjct: 177 EQQEEEERRIREEEERQKALKEERMRKLQEEARLAAQRALEEKRKLEEERKEQERKE 233
>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/54 (16%), Positives = 29/54 (53%)
Frame = -2
Query: 441 KEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRIVK 280
++ + +++ I++ +K K Y+ + +++ +++ +WR GR + +K
Sbjct: 1153 RKADVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWELKRKWRNKTTNGRRKAIK 1206
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 348 KQLKDMEERWRKLQETGRSRIVKITELLETIN 253
KQL+ + K QE GR + ++TEL + +N
Sbjct: 185 KQLQRVSSELHKEQENGRDKNTELTELRDLLN 216
>SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39)
Length = 738
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = -1
Query: 250 LEERLTEIRIKLHVIESKLTTTVILEYLTTKSVDEKF-KERDDTH-KEIEA 104
++ +++ IR K+ VIE + V L Y ++ V +K+ KE D H KEI+A
Sbjct: 337 VQHKISSIREKMTVIEDMESQLVTL-YSNSECVLDKYRKELQDLHNKEIDA 386
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,646,404
Number of Sequences: 59808
Number of extensions: 306260
Number of successful extensions: 1264
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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