BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0979 (598 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 30 0.065 AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 27 0.35 AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 25 2.5 Z49814-1|CAA89968.1| 137|Anopheles gambiae serine proteinase pr... 24 3.2 AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. 24 4.3 >AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. Length = 1133 Score = 29.9 bits (64), Expect = 0.065 Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%) Frame = -2 Query: 498 DPHDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERW 319 + + +RR DVQA+ A ER SE + + + A++ E+ + L +E+R Sbjct: 382 EAYGTVRRTLQDVQAKQAAIERGMRNASERVTRIQKDARQIEQDLQERNRDGLSQVEQR- 440 Query: 318 RKLQETGRSRI-VKITELLETINSSKR 241 ++ ET ++++ + EL I S++R Sbjct: 441 KQAVETEKAQLKERNDELASMIASAQR 467 >AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. Length = 1201 Score = 27.5 bits (58), Expect = 0.35 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 5/93 (5%) Frame = -2 Query: 492 HDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSY-----SKNTSKQLKDME 328 ++ +RR + E +KE++ + L + + KEE+ K+ +KQ+KD Sbjct: 351 YEAMRRKEEECSRELNLKEQKRKELYAKQGRGSQFSSKEERDKWIQGELKSLNKQIKDKI 410 Query: 327 ERWRKLQETGRSRIVKITELLETINSSKRGLQK 229 KLQ+ + I K EL + I ++ Sbjct: 411 SHQNKLQDDLKKDIAKQGELEKKIQEHTESFEQ 443 >AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase protein. Length = 1222 Score = 24.6 bits (51), Expect = 2.5 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = -2 Query: 357 NTSKQLKDMEERWRKLQETGRSRIVKITELL 265 N +L + ERW +QE R +I K+ + L Sbjct: 990 NLGMKLLESPERWNSIQEAAR-KITKVLQQL 1019 >Z49814-1|CAA89968.1| 137|Anopheles gambiae serine proteinase protein. Length = 137 Score = 24.2 bits (50), Expect = 3.2 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = -1 Query: 130 DDTHKEI-EAESGEVCETLNLCDLVFN 53 D KE+ ++ S EVC +N+CD FN Sbjct: 87 DWIEKEVNQSLSYEVCTGVNVCDRKFN 113 >AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. Length = 471 Score = 23.8 bits (49), Expect = 4.3 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -1 Query: 118 KEIEAESGEVCETLNLCDLVFN 53 + + A+S + E L LCD++FN Sbjct: 59 RRVRAKSKAMTEFLPLCDVLFN 80 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 546,814 Number of Sequences: 2352 Number of extensions: 10053 Number of successful extensions: 26 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 26 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 57609459 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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