Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0979
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    30   0.065
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.35 
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.5  
Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase pr...    24   3.2  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   4.3  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 29.9 bits (64), Expect = 0.065
 Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = -2

Query: 498 DPHDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERW 319
           + +  +RR   DVQA+ A  ER     SE  + + + A++ E+   +     L  +E+R 
Sbjct: 382 EAYGTVRRTLQDVQAKQAAIERGMRNASERVTRIQKDARQIEQDLQERNRDGLSQVEQR- 440

Query: 318 RKLQETGRSRI-VKITELLETINSSKR 241
           ++  ET ++++  +  EL   I S++R
Sbjct: 441 KQAVETEKAQLKERNDELASMIASAQR 467


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
 Frame = -2

Query: 492 HDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSY-----SKNTSKQLKDME 328
           ++ +RR   +   E  +KE++ + L        + + KEE+        K+ +KQ+KD  
Sbjct: 351 YEAMRRKEEECSRELNLKEQKRKELYAKQGRGSQFSSKEERDKWIQGELKSLNKQIKDKI 410

Query: 327 ERWRKLQETGRSRIVKITELLETINSSKRGLQK 229
               KLQ+  +  I K  EL + I       ++
Sbjct: 411 SHQNKLQDDLKKDIAKQGELEKKIQEHTESFEQ 443


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 357  NTSKQLKDMEERWRKLQETGRSRIVKITELL 265
            N   +L +  ERW  +QE  R +I K+ + L
Sbjct: 990  NLGMKLLESPERWNSIQEAAR-KITKVLQQL 1019


>Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase
           protein.
          Length = 137

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 130 DDTHKEI-EAESGEVCETLNLCDLVFN 53
           D   KE+ ++ S EVC  +N+CD  FN
Sbjct: 87  DWIEKEVNQSLSYEVCTGVNVCDRKFN 113


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 118 KEIEAESGEVCETLNLCDLVFN 53
           + + A+S  + E L LCD++FN
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFN 80


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,814
Number of Sequences: 2352
Number of extensions: 10053
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)