Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0978
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY874862-1|AAX59898.1|  424|Homo sapiens SH3-binding kinase prot...    31   4.6  
AF272349-1|AAL36980.1|  193|Homo sapiens quaking protein 3 protein.    31   4.6  

>AY874862-1|AAX59898.1|  424|Homo sapiens SH3-binding kinase
           protein.
          Length = 424

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -1

Query: 146 DTMRRCHRSKFSALPSLIGRRLRHYSLRPQRILL 45
           DT++RC +    AL  + GR+L H  ++P+ +LL
Sbjct: 149 DTVKRCVQQLGLALDFMHGRQLVHRDIKPENVLL 182


>AF272349-1|AAL36980.1|  193|Homo sapiens quaking protein 3 protein.
          Length = 193

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 34/95 (35%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
 Frame = +1

Query: 244 QPGPRAFTRRAQS------QGESSRPQTFGRSCRFLGELCHSDTSAEGCH*ICEAILGRR 405
           QP PRA TR A++      +    R +  GR  R LG       SA G          R 
Sbjct: 37  QPAPRARTRPAETRLPPARRPREGRAEPGGRERRRLGARRARAESACGGRASARCRPPRG 96

Query: 406 SR*EEEVEATPAHTGTPATEDPVPHPRLPRNHCLS 510
           S  E E E  PA +GTP  E P    R PR   LS
Sbjct: 97  SAREPERE--PARSGTPGPERPAAGAR-PRPSLLS 128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,315,366
Number of Sequences: 237096
Number of extensions: 1876786
Number of successful extensions: 9540
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9540
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)