BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0978 (638 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 5.8 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.8 AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 7.6 AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 21 7.6 >L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein protein. Length = 74 Score = 21.8 bits (44), Expect = 5.8 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = +1 Query: 442 HTGTPATEDPVPHPRLPRNHCL 507 HTG E P H R R+H L Sbjct: 4 HTGEKPFECPECHKRFTRDHHL 25 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 21.8 bits (44), Expect = 5.8 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = +1 Query: 454 PATEDPVPHPRLPRNH 501 P + P P P PRNH Sbjct: 1852 PVSGSPEPPPPPPRNH 1867 >AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. Length = 554 Score = 21.4 bits (43), Expect = 7.6 Identities = 12/43 (27%), Positives = 21/43 (48%) Frame = -1 Query: 191 SRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSLR 63 +R R +F + S + + H++K +GR LR+Y R Sbjct: 482 NRERGVFKLVDSKAVSRLWGLHKNKPDMNYETMGRALRYYYQR 524 >AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein protein. Length = 87 Score = 21.4 bits (43), Expect = 7.6 Identities = 8/21 (38%), Positives = 10/21 (47%) Frame = +3 Query: 222 IGQGSPRSARSSSLYPTSPEP 284 + PRS R L+P P P Sbjct: 37 VAMRDPRSNRGPVLFPPGPPP 57 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 167,285 Number of Sequences: 438 Number of extensions: 3415 Number of successful extensions: 21 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19193721 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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