Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0977
         (459 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    38   2e-04
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   2.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   2.9  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   3.9  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   3.9  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    22   9.0  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    22   9.0  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          22   9.0  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 37.5 bits (83), Expect = 2e-04
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1    IQRCRVRLRSVAMEGTFGRVYRGTYADE-EAREQEVLVKTVAEHASQVQVSLLLQEGCML 177
            I+   +R   V   G FGRV++G +  E E+ +  V +K + E +        L+E  ++
Sbjct: 829  IKEAEIRRGGVLGMGAFGRVFKGVWMPEGESVKIPVAIKVLMEMSGSESSKEFLEEAYIM 888

Query: 178  YGLHHERVLSVLGVSIEDQ 234
              + H  +L +L V +  Q
Sbjct: 889  ASVEHPNLLKLLAVCMTSQ 907


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 223 C*LRERTAHVRDGVRTTCSLLEEAA 149
           C + E++    +GV+T+  L EEAA
Sbjct: 653 CSIMEKSQKSGEGVKTSAKLAEEAA 677


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 223 C*LRERTAHVRDGVRTTCSLLEEAA 149
           C + E++    +GV+T+  L EEAA
Sbjct: 653 CSIMEKSQKSGEGVKTSAKLAEEAA 677


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 6/26 (23%), Positives = 16/26 (61%)
 Frame = -1

Query: 99  LLSCFLISISPAVDSAERPLHRYGTQ 22
           ++  +++ ++P+V+    P H +G Q
Sbjct: 523 IVELYILDLTPSVNDLNHPFHLHGYQ 548


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +3

Query: 258 WDAGWRNMKLFLLACRGVTIXXXXXXXXXXXLTTQHVVRMALHALDGLLYLHS 416
           WD G+    L LL CR  TI           L  ++ VR+ L   DGL +  S
Sbjct: 37  WD-GYTEDDLTLL-CRLRTINSELENTNFSVLHPENTVRLRLQCNDGLFFQSS 87


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 312 SLLCTPARIASC 277
           S+ C PAR ASC
Sbjct: 75  SMRCAPARTASC 86


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 390 LDGLLYLHSQHVLHKDI 440
           L+ L Y H   ++H+D+
Sbjct: 105 LEALRYCHENDIIHRDV 121


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 13  RVRLRSVAMEGTFGRVYRGTYADE 84
           +++L  V  +G FG V+RG +  E
Sbjct: 58  QIQLVDVIGKGRFGEVWRGRWRGE 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,497
Number of Sequences: 2352
Number of extensions: 9269
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)