Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0977
(459 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 33 0.002
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 33 0.002
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 25 0.52
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 1.2
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 3.7
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 3.7
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 3.7
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 4.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 6.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 6.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 6.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 8.5
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 8.5
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 32.7 bits (71), Expect = 0.002
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +3
Query: 369 VRMALHALDGLLYLHSQHVLHKDI 440
+++AL L+G+ YLHSQ ++H+D+
Sbjct: 700 IQIALDVLEGIRYLHSQGLVHRDV 723
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 32.7 bits (71), Expect = 0.002
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +3
Query: 369 VRMALHALDGLLYLHSQHVLHKDI 440
+++AL L+G+ YLHSQ ++H+D+
Sbjct: 738 IQIALDVLEGIRYLHSQGLVHRDV 761
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.6 bits (51), Expect = 0.52
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Frame = +2
Query: 137 KYRYRCFFKKAACCTDSITNVCCPFSEL--ALRTKRLRSCCTLGCWMEKHEA-ILAGVQR 307
K +YR K C I C + L + R G ++ +A ILA +Q+
Sbjct: 98 KIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 157
Query: 308 SDHWRGTRGSTSAASNDSAR 367
S H R + +A D R
Sbjct: 158 SSHSRSQEKAVAAELEDEQR 177
Score = 23.0 bits (47), Expect = 1.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 275 SPSSIPRYNKNGAVWSSMLTPRTDST 198
SP+S PRY A S+ +PR S+
Sbjct: 822 SPASSPRYLSAAATSSTSTSPRPASS 847
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 385 MPSMACSIFTLNTCYIKTSHARNCI 459
+P+ C+ NTC I S+ C+
Sbjct: 159 IPASCCNSPENNTCSISNSYTNGCV 183
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 3.7
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 173 CCTDSITNVC 202
CCT SI N+C
Sbjct: 119 CCTASILNLC 128
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 3.7
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 173 CCTDSITNVC 202
CCT SI N+C
Sbjct: 119 CCTASILNLC 128
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 3.7
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 173 CCTDSITNVC 202
CCT SI N+C
Sbjct: 119 CCTASILNLC 128
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 4.8
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 326 TRGSTSAASN---DSARRQDGATCPRWLALSSL 415
T GST A++ +SA +DG PRW LS+L
Sbjct: 841 TIGSTYMAASGITESAESEDG---PRWGHLSTL 870
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 133 MHVRRRSLRELLALVLPHQHKSRGRLGRTSPPS 35
M ++ +S + LLA VL R + +PPS
Sbjct: 331 MELQEKSSKSLLANVLDIDDDIRHKNSAANPPS 363
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 133 MHVRRRSLRELLALVLPHQHKSRGRLGRTSPPS 35
M ++ +S + LLA VL R + +PPS
Sbjct: 331 MELQEKSSKSLLANVLDIDDDIRHKNSAANPPS 363
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 133 MHVRRRSLRELLALVLPHQHKSRGRLGRTSPPS 35
M ++ +S + LLA VL R + +PPS
Sbjct: 331 MELQEKSSKSLLANVLDIDDDIRHKNSAANPPS 363
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 133 MHVRRRSLRELLALVLPHQHKSRGRLGRTSPPS 35
M ++ +S + LLA VL R + +PPS
Sbjct: 331 MELQEKSSKSLLANVLDIDDDIRHKNSAANPPS 363
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 133 MHVRRRSLRELLALVLPHQHKSRGRLGRTSPPS 35
M ++ +S + LLA VL R + +PPS
Sbjct: 331 MELQEKSSKSLLANVLDIDDDIRHKNSAANPPS 363
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 133 MHVRRRSLRELLALVLPHQHKSRGRLGRTSPPS 35
M ++ +S + LLA VL R + +PPS
Sbjct: 331 MELQEKSSKSLLANVLDIDDDIRHKNSAANPPS 363
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 6.4
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = +3
Query: 231 PNGSVLVVPWDAGWRN 278
P+G ++++ W + W N
Sbjct: 230 PSGLIVIISWVSFWLN 245
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 6.4
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = +3
Query: 231 PNGSVLVVPWDAGWRN 278
P+G ++++ W + W N
Sbjct: 230 PSGLIVIISWVSFWLN 245
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 133 MHVRRRSLRELLALVLPHQHKSRGRLGRTSPPS 35
M ++ +S + LLA VL R + +PPS
Sbjct: 399 MELQEKSSKSLLANVLDIDDDIRHKNSAANPPS 431
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 133 MHVRRRSLRELLALVLPHQHKSRGRLGRTSPPS 35
M ++ +S + LLA VL R + +PPS
Sbjct: 399 MELQEKSSKSLLANVLDIDDDIRHKNSAANPPS 431
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 6.4
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = +3
Query: 231 PNGSVLVVPWDAGWRN 278
P+G ++++ W + W N
Sbjct: 169 PSGLIVIISWVSFWLN 184
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 47 RSAESTAGLMLMRKHESKKFS 109
+S + TAG + R+H S+ F+
Sbjct: 338 QSNKRTAGNLATREHPSRNFT 358
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 91 REQEVLVKTVAEHASQVQVSLLLQEGC 171
R+QE L + AS + L EGC
Sbjct: 181 RQQEELCLVCGDRASGYHYNALTCEGC 207
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,779
Number of Sequences: 438
Number of extensions: 2378
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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