Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0976
(628 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 34 8e-04
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 26 0.30
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 0.69
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 25 0.69
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 23 1.6
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 23 1.6
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 21 8.4
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 34.3 bits (75), Expect = 8e-04
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = -2
Query: 267 GNIGPFCECDNFTCDRYKGQLCSGHGTC---VCG-KCSCEPDYGGPACQCLKDTKVCMSP 100
G +G CE + C + C +GTC V G +C C P + GP C+ D C+S
Sbjct: 251 GTLGYICEINVDDC---RPGACHNNGTCLDKVGGFECKCPPGFVGPRCE--GDINECLS- 304
Query: 99 ENNKICSGNGKCVCGQCV 46
CS G C Q V
Sbjct: 305 ---NPCSNAGTLDCVQLV 319
Score = 26.6 bits (56), Expect = 0.17
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Frame = -2
Query: 204 CSGHGTCVCGK----CSCEPDYGGPACQ 133
C GTC+ G C+C+P + G CQ
Sbjct: 32 CMNGGTCIDGINSYICTCKPGFTGSNCQ 59
Score = 25.4 bits (53), Expect = 0.39
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Frame = -2
Query: 210 QLCSGHGTCV----CGKCSCEPDYGGPACQCLKDTKVCMSPENNKIC---SGNGKCVC-- 58
+LC+ +GTC +C C Y G CQ + +N C G+ C C
Sbjct: 154 KLCN-NGTCEDIGNSHRCHCSDGYSGSYCQTEINECDSAPCQNGGTCLDLIGSYSCKCPK 212
Query: 57 ---GQ-CVCNVDDDK 25
GQ C NVDD K
Sbjct: 213 GFQGQNCELNVDDCK 227
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 446 CLCSPGRFGKSCECS 402
C C G +GK+CE S
Sbjct: 362 CTCPEGFYGKNCEFS 376
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 446 CLCSPGRFGKSCECSAQG 393
C C P GK+CE +G
Sbjct: 441 CYCPPKHTGKNCEIYDRG 458
Score = 22.6 bits (46), Expect = 2.8
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -3
Query: 449 VCLCSPGRFGKSCE 408
+C C PG G +C+
Sbjct: 46 ICTCKPGFTGSNCQ 59
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 332 CSNRGTCICGV 300
C N GTCI G+
Sbjct: 32 CMNGGTCIDGI 42
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3
Query: 446 CLCSPGRFGKSCE 408
C C PG G CE
Sbjct: 284 CKCPPGFVGPRCE 296
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 25.8 bits (54), Expect = 0.30
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Frame = -3
Query: 497 NASPLVCSGEG--VSACGV---CLCSPGRFGKSC 411
N++P +C G V+ GV C C PG GK C
Sbjct: 32 NSAPSICGEHGHCVNLPGVGHRCQCQPGFTGKYC 65
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 24.6 bits (51), Expect = 0.69
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 415 LFPKRPGLHRHTPHADTPSPLHTSG 489
L P PGL H PH + + T G
Sbjct: 229 LIPPHPGLSPHPPHLSSHPAIVTPG 253
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 24.6 bits (51), Expect = 0.69
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 415 LFPKRPGLHRHTPHADTPSPLHTSG 489
L P PGL H PH + + T G
Sbjct: 121 LIPPHPGLSPHPPHLSSHPAIVTPG 145
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 96 NNKICSGNGKCVCGQCVCNVDDD 28
+ K+ GNG+C+ + CN D
Sbjct: 111 DGKLSCGNGECIDKELFCNGKPD 133
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 96 NNKICSGNGKCVCGQCVCNVDDD 28
+ K+ GNG+C+ + CN D
Sbjct: 118 DGKLSCGNGECIDKELFCNGKPD 140
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 591 KYPLWVYRDSLQGG 550
KY LW++ D+ GG
Sbjct: 312 KYKLWLHVDAAWGG 325
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,145
Number of Sequences: 336
Number of extensions: 2845
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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