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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0976
         (628 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S...    32   0.078
SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|c...    26   5.1  
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    25   6.8  
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce...    25   6.8  
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch...    25   6.8  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    25   9.0  
SPAC343.12 |rds1||conserved fungal protein|Schizosaccharomyces p...    25   9.0  
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po...    25   9.0  
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar...    25   9.0  

>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
           Mde10|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 512

 Score = 31.9 bits (69), Expect = 0.078
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = -2

Query: 243 CDNFTCDRYKGQLCSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSG-NGK 67
           CD  TC   KG LC       C +C     +      C + T  C  PE    C+G + K
Sbjct: 341 CDGKTCKLTKGSLCDDQQDACCYQC----HFKNAGTLCRQSTNPCDKPE---FCTGISSK 393

Query: 66  C 64
           C
Sbjct: 394 C 394


>SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 137

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 87  SCCSLATCTLWC 122
           SCC   TC +WC
Sbjct: 25  SCCHCETCRIWC 36


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 138 CQCLKDTKVCMSPENNKICSGNGKCVCGQC 49
           CQ  KD K  +SPE   +C  +  C  G C
Sbjct: 301 CQISKDLKYRVSPELGNVCFAS--CDLGYC 328


>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1131

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
 Frame = -3

Query: 470  EGVSACGVCLCSPGRFGKSCE-CSAQGGVSVEQERGCRPTNATSSPLCSNRGTCICG 303
            E    CG+    P R+ K CE C    GV V        +  TS   C+ +     G
Sbjct: 945  ESEPVCGIAQLPPNRWEKKCEVCGNSFGVCVSSPN----SGLTSHVTCAEKANWYLG 997


>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 297

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 144 PACQCLKDTKVCMSPENNKICSGNGKCVC 58
           P+C C ++ K C S E    CS   K  C
Sbjct: 253 PSC-CSQEKKGCCSTEKTSCCSQEKKSCC 280



 Score = 25.0 bits (52), Expect = 9.0
 Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
 Frame = -2

Query: 228 CDRYKGQLCSGHGTCVC-----GKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKC 64
           C + K   CS      C     G CS E      +C C ++ K C + E    CS     
Sbjct: 240 CSQEKKSCCSSKKPSCCSQEKKGCCSTEKT----SC-CSQEKKSCCTSEKPSCCSNGKST 294

Query: 63  VC 58
           VC
Sbjct: 295 VC 296


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 19/68 (27%), Positives = 26/68 (38%)
 Frame = +1

Query: 295  SQTPQIQVPRLEQSGLEVALVGRQPRSCSTDTPPCAEHSQLFPKRPGLHRHTPHADTPSP 474
            SQ P   VP +    +  ++  + P S +  T P    S   P       H P    P+P
Sbjct: 1483 SQLPPA-VPNVPVPSMIPSVAQQPPSSVAPATAP----SSTLPPSQSSFAHVPSPAPPAP 1537

Query: 475  LHTSGLAL 498
             H S  AL
Sbjct: 1538 QHPSAAAL 1545


>SPAC343.12 |rds1||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 402

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 496 LYAKFPAVHKDSRKSNSNSTL*TVPIYPQGIF 591
           ++  FPA+H  S   ++N T  + P YP G +
Sbjct: 245 VWQNFPALHLVSPPVHTNFTNGSFPQYPNGTY 276


>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 556

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = +1

Query: 259 DITLVGSSILLHSQTPQIQVPRLEQSGLEVALVGRQPRSCSTDTPPCAEHSQLFPKRPGL 438
           D T   S I   + T  +  PR +    ++ L  R P S S  +    +++ + P R   
Sbjct: 124 DETFNNSPIATPNTTIGVSTPRTDSGIDDIELTQRTPPSSSHTSSSILQNTPVTPSRKIF 183

Query: 439 HRHTP 453
           H  +P
Sbjct: 184 HYLSP 188


>SPAC2F7.03c |pom1||DYRK family protein kinase
           Pom1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1087

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 400 AEHSQLFPKRPGLHRHTPHADTPSP 474
           A H+ + PKR G  RHT    T  P
Sbjct: 233 AYHASMAPKRSGSWRHTNFHSTSHP 257


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,089,733
Number of Sequences: 5004
Number of extensions: 40203
Number of successful extensions: 119
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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