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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0976
         (628 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396...    34   0.11 
12_02_1279 + 27510605-27513301                                         32   0.43 
10_08_0798 + 20649370-20649428,20649515-20649719                       32   0.43 
04_04_1322 + 32640414-32642327                                         31   0.57 
10_06_0035 - 9896289-9896390,9897394-9897503,9897587-9897715,989...    31   0.75 
01_05_0282 - 20347915-20348874,20348968-20349012,20349568-203498...    30   1.3  
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275...    29   2.3  
06_03_1495 + 30566992-30567084,30567181-30567235,30567320-30567507     29   4.0  
10_06_0012 - 9586478-9588880                                           28   5.3  
07_03_1693 - 28756331-28756435,28756558-28756664,28757114-287572...    28   5.3  
04_04_0499 + 25674024-25674233,25674515-25675072,25675320-256754...    28   5.3  
04_03_0758 + 19322891-19323193,19323606-19323778,19324778-19326095     28   5.3  
02_05_0791 + 31773175-31773308,31773403-31773561,31775867-317759...    28   5.3  
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26...    28   7.0  
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391...    28   7.0  
02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677...    28   7.0  
02_04_0281 + 21563588-21563696,21565053-21565708,21565793-215658...    25   7.7  
12_01_1001 - 10145663-10147006                                         27   9.2  
09_06_0144 + 21149338-21150651                                         27   9.2  
07_03_0952 + 22856077-22856185,22856639-22856817                       27   9.2  
06_02_0210 - 13039479-13039566,13039674-13039770,13040470-130405...    27   9.2  
04_04_0114 + 22861300-22861476,22864952-22864969,22865187-22867163     27   9.2  
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731...    27   9.2  
02_05_0219 + 26870970-26873117                                         27   9.2  
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388...    27   9.2  
02_01_0088 - 627825-628984,629339-629509,629612-630416                 27   9.2  

>03_01_0527 +
           3960982-3961290,3961371-3961464,3961898-3962084,
           3962194-3962449,3962561-3962773,3962856-3962942,
           3963089-3963223,3963296-3963409,3963507-3963754,
           3963824-3963904,3963979-3964210,3964340-3964438,
           3964513-3964701,3964928-3965023
          Length = 779

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -2

Query: 330 LQPRDLYLWRLRVQQD-GRPH*GNIGPFCECDNFTCDRYKGQLCSGHGTCVCGKCSCEPD 154
           + P D Y  +++ +++    + G  G FCE     C       CSGHG C  G C C+  
Sbjct: 230 VNPEDAYSSKVKFKEECDCKYDGLWGRFCET-RVECSCINQ--CSGHGHCRGGFCQCDGG 286

Query: 153 YGGPAC 136
           Y G  C
Sbjct: 287 YFGIDC 292



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -3

Query: 479 CSGEGVSACGVCLCSPGRFGKSCECSAQGGVS 384
           CSG G    G C C  G FG  C   +   V+
Sbjct: 270 CSGHGHCRGGFCQCDGGYFGIDCSMPSNYSVA 301


>12_02_1279 + 27510605-27513301
          Length = 898

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 443 LCSPGRFGKSCECSAQGGVSVEQERGCRPTNATSSPLCSNRGTC 312
           LC+PG  G SC C      S     GC P + ++ PL ++  TC
Sbjct: 320 LCTPGTNGSSCSC--PDAFSTYSTGGCAPADGSALPLLAD--TC 359


>10_08_0798 + 20649370-20649428,20649515-20649719
          Length = 87

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = -2

Query: 195 HGTCVCGK-CSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKCVCGQC 49
           H TC CG  C C P      C+C ++++          CS    C C  C
Sbjct: 32  HTTCSCGDHCGCNP------CRCGRESQPTGRENRRAGCSCGDSCTCASC 75


>04_04_1322 + 32640414-32642327
          Length = 637

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = -3

Query: 503 AYNASPLVCSGEGVSACGVCLCSPGRFGKSCECSAQGGVSVEQERGCRPTNATSSPLC-S 327
           A  A+ L  S  G   C    C+ G   ++  C + GG    QE GC  +    +  C +
Sbjct: 245 ARGATGLCISHGGGQRCQKPGCNKGAESRTAYCKSHGGGKRCQELGCTKSAEGKTEFCIA 304

Query: 326 NRGTCICGVCECNK 285
           + G   CG   C K
Sbjct: 305 HGGGRRCGTPGCTK 318


>10_06_0035 -
           9896289-9896390,9897394-9897503,9897587-9897715,
           9898734-9898800,9898888-9898970,9899878-9899959,
           9900049-9900125,9900206-9900289,9900368-9900437,
           9900580-9900668,9900921-9901613,9902833-9903142
          Length = 631

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = -2

Query: 258 GPFCECDNFTCDRYKGQLCSGHGTC-VCGKCSCEPDYGGPACQCLKDTKVCMSPENNKIC 82
           G  CEC  F   ++KG    G+  C   G   C  ++GG    C  +T+   + +    C
Sbjct: 446 GRVCECPTFNGVQFKG---DGYSNCEPAGPGKCLINHGG----CWHETR---NGKTFSAC 495

Query: 81  --SGNGKCVC 58
             SGNGKC C
Sbjct: 496 QESGNGKCQC 505



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -2

Query: 204 CSGHGTCVCGKCSCEPDYGGPACQCLKD 121
           C     C C +CSC   +G   C C  D
Sbjct: 523 CKEKKACQCPECSCRDTWGDYECTCSGD 550


>01_05_0282 -
           20347915-20348874,20348968-20349012,20349568-20349816,
           20350393-20350581,20351051-20351155,20351165-20351488,
           20351493-20351555
          Length = 644

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -2

Query: 183 VCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKCVCGQCVCNVDDD 28
           VCG   C   Y      CLK T++    + +K C     C+C  C  + DDD
Sbjct: 508 VCGHTHCLYKYYH--ISCLKATQIASDKQLDKPCWYCPSCLCRVCHSDRDDD 557


>05_01_0351 +
           2750253-2751042,2751951-2751958,2752122-2752149,
           2754692-2754775,2755780-2757548
          Length = 892

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 364 QPRSCSTDTPPCAEHSQLFPKRPGLHRHTPHADTPSPLHTSGLALYAKFP 513
           QP +     PP    +Q  P  P LH+H P+     P HT  L L    P
Sbjct: 722 QPPARPAQQPPRPPVTQPLPPPPPLHQHQPY----QPRHTDALPLPLPLP 767


>06_03_1495 + 30566992-30567084,30567181-30567235,30567320-30567507
          Length = 111

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = -2

Query: 243 CDNFTCDRYKGQLCSGHGTCVCGKCSCEPDYGGP----ACQCLKDTKVCMSPENNKI 85
           C     + +K ++C+      C +C+C P   G      C C  DT V  +P N K+
Sbjct: 55  CSGRCANNWKKEMCNKMCNVCCNRCNCVPPGSGQDTRHLCPCY-DTMV--NPHNGKL 108


>10_06_0012 - 9586478-9588880
          Length = 800

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 183 VCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKCV 61
           +CG  S   D   P C CLK   +  SP+N  +   +G C+
Sbjct: 294 ICGPFSVCNDSNNPFCDCLKGFSI-RSPKNWDLEDRSGGCM 333


>07_03_1693 -
           28756331-28756435,28756558-28756664,28757114-28757245,
           28757412-28757478,28757553-28757635,28757824-28757905,
           28763101-28763177,28763278-28763361,28763443-28763512,
           28763625-28763713,28763801-28764487,28765700-28765997
          Length = 626

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 204 CSGHGTCVCGKCSCEPDYGGPACQC 130
           C     C C  CSCE  +G   C C
Sbjct: 517 CKDKLFCQCKDCSCENTWGSYECSC 541


>04_04_0499 +
           25674024-25674233,25674515-25675072,25675320-25675415,
           25675509-25675601,25675882-25676125,25676239-25676276,
           25676377-25676478
          Length = 446

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
 Frame = -3

Query: 446 CLCSPGRFGKSC-ECSAQGGVSVEQERGCRPTNATSSPLCSNRGTCICGVCE 294
           C+   G     C EC   G  ++E +        T  P C   G+ +C VCE
Sbjct: 388 CISCRGEGRLMCVECDGTGEPNIEPQFLEWVGEDTKCPYCEGLGSIVCDVCE 439


>04_03_0758 + 19322891-19323193,19323606-19323778,19324778-19326095
          Length = 597

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -1

Query: 256 AVLRVR-QLHVRPLQGAAVLGPRHVRVRQVQLRAGLRRARLPVPQGHQ 116
           A+LR R QL    LQ    L  + +R RQ Q +     A +P PQGH+
Sbjct: 411 ALLRQRAQLEQAALQEQLKLEMQQMRRRQEQRQRARELAIMPQPQGHR 458


>02_05_0791 +
           31773175-31773308,31773403-31773561,31775867-31775927,
           31776120-31776407
          Length = 213

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 519 SQGQSQKQLQLHLVDCPDIPT 581
           S    QK L+++L+DCPD P+
Sbjct: 176 SDDDKQKTLKINLIDCPDHPS 196


>08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-269805,
            269895-270098,271532-271664,271810-271881,273106-273168,
            273252-275034,275169-275217
          Length = 1229

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
 Frame = -2

Query: 207  LCSGHGTC--------VCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKCVCGQ 52
            LC   GTC        VCG   C   Y     +CLK +++ +  +    C     C+C  
Sbjct: 1088 LCKHCGTCEDDDKRFMVCGHPYCV--YKFYHIRCLKTSQLAIEQQKKLGCWYCPSCLCRG 1145

Query: 51   CVCNVDDDK 25
            C  + DDD+
Sbjct: 1146 CFQDKDDDQ 1154


>04_04_1120 +
           31037811-31038813,31038903-31038991,31039094-31039163,
           31039270-31039353,31039452-31039528,31039631-31039712,
           31039847-31039929,31040270-31040333,31040435-31040566,
           31040674-31040777,31040901-31040996,31041144-31041251
          Length = 663

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 204 CSGHGTCVCGKCSCEPDYGGPACQC 130
           CS    C C  CSC+  +G   C C
Sbjct: 522 CSEKLACSCPHCSCKNTWGSFDCSC 546


>02_05_0146 -
           26267245-26267339,26267427-26267469,26267589-26267725,
           26268172-26268299,26268419-26268495,26268593-26268679,
           26268817-26268933,26269115-26269165,26269383-26269497,
           26270033-26270292
          Length = 369

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
 Frame = -2

Query: 204 CSGHGTCVCGKCSCEPDY--GGPACQCLKDTKVCMSPENNKI--CSGNGKCVCGQCVC 43
           C G G   C +CS         P        +   +P   +   CSG GK +C  C+C
Sbjct: 275 CLGTGYLACARCSSTGTLVLTEPVSTFSDGDQPLSTPRTERCPNCSGAGKVMCPTCLC 332


>02_04_0281 +
           21563588-21563696,21565053-21565708,21565793-21565879,
           21566487-21567461,21567640-21567786
          Length = 657

 Score = 25.4 bits (53), Expect(2) = 7.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 84  CSGNGKCVCGQCVCNVDDDKHYS 16
           C GNGKC C +   +    +H S
Sbjct: 466 CMGNGKCSCEEANSSDGSQRHLS 488



 Score = 20.6 bits (41), Expect(2) = 7.7
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -2

Query: 219 YKGQLCSGHGTCVC 178
           + G  C G+G C C
Sbjct: 461 HSGTKCMGNGKCSC 474


>12_01_1001 - 10145663-10147006
          Length = 447

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 606 GNNYSKYPLWVYRDSL 559
           GN YSK P +VYR+S+
Sbjct: 401 GNRYSKNPFYVYRNSM 416


>09_06_0144 + 21149338-21150651
          Length = 437

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +1

Query: 358 GRQPRSCSTDTPPCAEHSQLFPKRPGLHRHTPHADTPSPLHTSG 489
           GR  R      PP   H+ LF  RP  H    H +    L  +G
Sbjct: 167 GRATRGLPMGAPPVHHHAALFKPRPSPHVEHDHRNREYYLPAAG 210


>07_03_0952 + 22856077-22856185,22856639-22856817
          Length = 95

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -1

Query: 586 SPVGISGQSTRWSWSCFCDCPCERPGISRTTRVR 485
           S V + G   RWSWSC   C        RT+R R
Sbjct: 45  SLVELQGWLLRWSWSCL-SCKLGNDDPQRTSRQR 77


>06_02_0210 -
           13039479-13039566,13039674-13039770,13040470-13040545,
           13041222-13041356
          Length = 131

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 84  CSGNGKCVCGQCVCN-VDDDKHYSGMY 7
           C GNG  VC QC  + V+   H++G +
Sbjct: 67  CEGNGAIVCNQCKGDGVNSVDHFNGRF 93


>04_04_0114 + 22861300-22861476,22864952-22864969,22865187-22867163
          Length = 723

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 18/56 (32%), Positives = 20/56 (35%)
 Frame = -3

Query: 485 LVCSGEGVSACGVCLCSPGRFGKSCECSAQGGVSVEQERGCRPTNATSSPLCSNRG 318
           L  S  G   C    CS G  G +  C   GG       GC      S+PLC   G
Sbjct: 446 LCISHGGGRRCQFPDCSKGAQGSTLYCKGHGGGKRCIFDGCSKGAEGSTPLCKAHG 501


>03_02_0917 +
           12372122-12372422,12372487-12372524,12373103-12373186,
           12373796-12374504,12374641-12374729,12374834-12374903,
           12374977-12375060,12375097-12375239,12375337-12375418,
           12375605-12375687,12375769-12375835,12376287-12376376,
           12377631-12377737,12377862-12377969
          Length = 684

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 186 CVCGKCSCEPDYGGPACQC 130
           C C  CSCE  +G   C C
Sbjct: 594 CQCKGCSCENTWGSYECSC 612


>02_05_0219 + 26870970-26873117
          Length = 715

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +2

Query: 125 LRHWQAGPP*SGSQLHLPHTHVPWPEHSCPL*RSHVKLSHS 247
           L H+   PP   +   +PH   P   H  PL +   K  HS
Sbjct: 257 LNHYHHQPPNPAATFFMPHPSFPEHNHQSPLLQPPPKRHHS 297


>02_04_0624 +
           24538095-24538183,24538429-24538612,24538725-24538886,
           24538988-24539225,24539301-24539370,24539439-24539530,
           24539799-24539836,24540018-24540039,24540462-24540618,
           24540702-24540753,24542144-24542207,24542279-24542362,
           24543418-24543543,24543622-24543818,24543903-24544091,
           24544186-24544434,24544507-24544556,24544977-24545059,
           24545164-24545449,24545751-24545794,24545878-24546626
          Length = 1074

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -2

Query: 195 HGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKCVCGQCVCNVDDD 28
           H T V G    EP Y  PA  CL  +K   +   N+    NG+    + VC ++DD
Sbjct: 732 HVTKVFGIKKAEPLYNLPAESCLVSSK---TTRTNQSKYHNGQNPLSKEVCVIEDD 784


>02_01_0088 - 627825-628984,629339-629509,629612-630416
          Length = 711

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/51 (31%), Positives = 20/51 (39%)
 Frame = -3

Query: 464 VSACGVCLCSPGRFGKSCECSAQGGVSVEQERGCRPTNATSSPLCSNRGTC 312
           VS    C+ SP   G  C C+     +   E GC+  N   SP     G C
Sbjct: 234 VSTNSSCINSPNATGYLCACNNGFAGNPYLEGGCQDINECESPGQYCHGIC 284


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,086,342
Number of Sequences: 37544
Number of extensions: 332947
Number of successful extensions: 1369
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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