Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0976
(628 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42620.1 68418.m05188 expressed protein 40 0.001
At1g32190.1 68414.m03959 expressed protein 38 0.005
At3g57630.2 68416.m06421 exostosin family protein contains Pfam ... 34 0.089
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ... 34 0.089
At4g20110.1 68417.m02943 vacuolar sorting receptor, putative sim... 33 0.21
At5g64550.1 68418.m08112 loricrin-related contains weak similari... 31 0.47
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim... 31 0.47
At2g23240.1 68415.m02775 plant EC metallothionein-like family 15... 31 0.63
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 31 0.83
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 30 1.1
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 30 1.1
At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein... 30 1.4
At1g64140.1 68414.m07266 expressed protein similar to putative d... 30 1.4
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 29 1.9
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 29 1.9
At4g28190.1 68417.m04041 expressed protein 29 2.5
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 29 3.3
At3g11800.1 68416.m01446 expressed protein 29 3.3
At2g45410.1 68415.m05649 LOB domain protein 19 / lateral organ b... 28 4.4
At2g20825.1 68415.m02452 expressed protein 28 4.4
At4g34370.1 68417.m04883 IBR domain-containing protein similar t... 28 5.8
At2g24860.1 68415.m02973 chaperone protein dnaJ-related similar ... 28 5.8
At1g67270.1 68414.m07656 hypothetical protein 28 5.8
At1g21210.1 68414.m02651 wall-associated kinase 4 28 5.8
At5g39970.1 68418.m04847 expressed protein low similarity to up-... 27 7.7
At5g06130.2 68418.m00682 chaperone protein dnaJ-related similar ... 27 7.7
At5g06130.1 68418.m00681 chaperone protein dnaJ-related similar ... 27 7.7
At5g04045.1 68418.m00385 Expressed protein 27 7.7
At2g42000.1 68415.m05195 plant EC metallothionein-like family 15... 27 7.7
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKCVC-GQCVCNVDDD 28
C+ +G CV GKC C Y G C+ + C P N C+G+GKC G C+C +
Sbjct: 607 CNFNGDCVDGKCRCLLGYHGHDCR----NRSC--PNN---CNGHGKCTTQGVCIC----E 653
Query: 27 KHYSGMYCN 1
++G+ C+
Sbjct: 654 NGFTGIDCS 662
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/61 (29%), Positives = 22/61 (36%)
Frame = -3
Query: 488 PLVCSGEGVSACGVCLCSPGRFGKSCECSAQGGVSVEQERGCRPTNATSSPLCSNRGTCI 309
P C+ G G C C G G C + R C P N C+ +G CI
Sbjct: 604 PNSCNFNGDCVDGKCRCLLGYHGHDC-----------RNRSC-PNNCNGHGKCTTQGVCI 651
Query: 308 C 306
C
Sbjct: 652 C 652
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 37.9 bits (84), Expect = 0.005
Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = -2
Query: 255 PFCECDNFTCDRYKGQLCSGHGTCVCGKCSCEPDYGGPACQCLKDTKV--CMSPENNKIC 82
P C C C + G G C C KCSC G +C C K + V C P K
Sbjct: 303 PSCSCPKPRCPKPSCSCGCGCGDCGCFKCSCPTLKGCFSC-CKKPSCVSSCCCP-TFKCS 360
Query: 81 SGNGKCVCGQCVC 43
S GK C +C C
Sbjct: 361 SCFGKPKCPKCSC 373
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = -2
Query: 228 CDRYKGQLCSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGK 67
C +K C G C KCSC P +C + + C + C G G+
Sbjct: 354 CPTFKCSSCFGKPKCP--KCSCWKCLKCPDTECCRSSCCCSGCFSWLCCCGGGR 405
>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 791
Score = 33.9 bits (74), Expect = 0.089
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -2
Query: 330 LQPRDLYLWRLRVQQDGRPH*GNI-GPFCECD-NFTCDRYKGQLCSGHGTCVCGKCSCEP 157
+ P D Y +++++++ + G FCE TC CSGHG C G C C+
Sbjct: 239 VDPEDAYAMKVKIKEECDCKYDCLWGRFCEIPVQCTCVNQ----CSGHGKCRGGFCQCDK 294
Query: 156 DYGGPAC 136
+ G C
Sbjct: 295 GWFGTDC 301
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -3
Query: 479 CSGEGVSACGVCLCSPGRFGKSCECSAQGGVSVEQERGCRPTN 351
CSG G G C C G FG C + E + RP +
Sbjct: 279 CSGHGKCRGGFCQCDKGWFGTDCSIPSTLSTVGEWPQWLRPAH 321
>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 793
Score = 33.9 bits (74), Expect = 0.089
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -2
Query: 330 LQPRDLYLWRLRVQQDGRPH*GNI-GPFCECD-NFTCDRYKGQLCSGHGTCVCGKCSCEP 157
+ P D Y +++++++ + G FCE TC CSGHG C G C C+
Sbjct: 241 VDPEDAYAMKVKIKEECDCKYDCLWGRFCEIPVQCTCVNQ----CSGHGKCRGGFCQCDK 296
Query: 156 DYGGPAC 136
+ G C
Sbjct: 297 GWFGTDC 303
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -3
Query: 479 CSGEGVSACGVCLCSPGRFGKSCECSAQGGVSVEQERGCRPTN 351
CSG G G C C G FG C + E + RP +
Sbjct: 281 CSGHGKCRGGFCQCDKGWFGTDCSIPSTLSTVGEWPQWLRPAH 323
>At4g20110.1 68417.m02943 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222; identical to vacuolar sorting
receptor-like protein (GI:2827665) [Arabidopsis
thaliana]
Length = 625
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -2
Query: 240 DNFTCDRYKGQLCSGHGTCVCGKCSCEPDYGGPACQCLKD 121
D TC+ C C C C C+ +GG C C D
Sbjct: 508 DGLTCEDINE--CKERSVCQCSGCRCKNSWGGYKCSCSGD 545
>At5g64550.1 68418.m08112 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 634
Score = 31.5 bits (68), Expect = 0.47
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = -3
Query: 503 AYNASPLVCSGEGVSACGVCLCSPGRFGKSCECSAQGGVSVEQERGCRPTNATSSPLC-S 327
A AS L G C C+ G K+ C A GG Q GC + + LC S
Sbjct: 225 ARGASGLCIGHGGGQRCQKLGCNKGAESKTTFCKAHGGGKRCQHLGCTKSAEGKTDLCIS 284
Query: 326 NRGTCICGVCE-CNK 285
+ G CG E C K
Sbjct: 285 HGGGRRCGFPEGCAK 299
>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 618
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNKI 85
C C C C C+ ++GG C+C + + M E+ I
Sbjct: 516 CKEKSACKCDGCKCKNNWGGYECKC-SNNSIYMKEEDTCI 554
>At2g23240.1 68415.m02775 plant EC metallothionein-like family 15
protein identical to EC protein homolog 2 (SP:Q42377)
{Arabidopsis thaliana}; identical to an EST:
GB:X92116:ATECPRHOM; contains a vertebrate
metallothionein signature (PS00203); contains Pfam
profile PF02068: Plant PEC family metallothionein
Length = 85
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -2
Query: 198 GHGTCVCG-KCSC-EPDYGGPACQCLKDTKVCMSPENNKICSGNGKCVCGQCVC 43
G + C +C C P GG +C+C ++ + + C C C C C
Sbjct: 7 GSASASCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCGEHCGCNPCNC 60
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 30.7 bits (66), Expect = 0.83
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQC------LKDTKVCMSPENNKI 85
C C C C+C+ +GG C+C +K+ C+ ++I
Sbjct: 517 CKEQSACQCDGCNCKNKWGGFECKCSGNRLYMKEQDTCIERSGSRI 562
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQC------LKDTKVCMSPENNKICS 79
C C C +CSC+ +G C C ++D C+S +++ S
Sbjct: 521 CKEKKACQCPECSCKNTWGSYECSCSGDLLYMRDHDTCISKTGSQVKS 568
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQC------LKDTKVCMSPENNKICS 79
C C C +CSC+ +G C C ++D C+S +++ S
Sbjct: 521 CKEKKACQCPECSCKNTWGSYECSCSGDLLYMRDHDTCISKTGSQVKS 568
>At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein 1
(SOL1) identical to CXC domain containing TSO1-like
protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427;
contains Pfam profile PF03638: Tesmin/TSO1-like CXC
domain; supporting cDNA
gi|7767426|gb|AF205142.1|AF205142
Length = 609
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 476 SGEGVSACGVCLCSPGRFGK-SCECSAQGGVSVEQERGCRPTNATSSPL 333
SGEG S+C C C + K CEC A G +E C N + P+
Sbjct: 320 SGEGDSSCKRCNCKKSKCLKLYCECFAAGFYCIEP---CSCINCFNKPI 365
>At1g64140.1 68414.m07266 expressed protein similar to putative
disease resistance protein GB:CAB40943 GI:4586107 from
[Arabidopsis thaliana]; weak similarity to Loricrin
(Swiss-Prot:P23490) [Homo sapiens]
Length = 646
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = -3
Query: 503 AYNASPLVCSGEGVSACGVCLCSPGRFGKSCECSAQGGVSVEQERGCRPTNATSSPLCSN 324
A S L S G C C+ G G + C A GG GC S+P C
Sbjct: 368 AEGLSGLCISHGGGRRCQSNGCTKGAQGSTMFCKAHGGGKRCTHSGCTKGAEGSTPFCKG 427
Query: 323 RG 318
G
Sbjct: 428 HG 429
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQCLKD 121
C C C +CSC+ +G C C D
Sbjct: 521 CKEKKACQCPECSCKNTWGSYECSCSGD 548
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQCLKD 121
C C C +CSC+ +G C C D
Sbjct: 521 CKEKKACQCPECSCKNTWGSYECSCSGD 548
>At4g28190.1 68417.m04041 expressed protein
Length = 237
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 380 EQERGCRPT--NATSSPLCSNRGTCICGVCECNKMEDPT 270
E+ERG R T SP C +C+C CE + + T
Sbjct: 186 EEERGSRKVYRGCTRSPSCKGCTSCVCFGCELCRFSECT 224
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGK 67
C C C +C C+ +G C C + + + C G+GK
Sbjct: 516 CKEKTVCQCPECKCKNTWGSYECSC---SNGLLYMREHDTCIGSGK 558
>At3g11800.1 68416.m01446 expressed protein
Length = 246
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = -2
Query: 180 CGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKCVCGQCVCNVDDDKHYSGM 10
C KCS G CL + + P+N K G C G + DKHY+ +
Sbjct: 162 CSKCS-----GDSKFVCLNKEECAIKPQNCKNQGGQVDCSLGIQLAFSGTDKHYTAL 213
>At2g45410.1 68415.m05649 LOB domain protein 19 / lateral organ
boundaries domain protein 19 (LBD19) identical to
SP|O22132 LOB domain protein 19 {Arabidopsis thaliana}
Length = 191
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 502 AKFPAVHKDSRKSNSNSTL*TVPIYPQGIFRIIVSICFESL 624
A+F AVHK SN++ L +P++ + +V++C+E++
Sbjct: 44 ARFAAVHKVFGASNASKMLLRLPLHKR--LDAVVTLCYEAM 82
>At2g20825.1 68415.m02452 expressed protein
Length = 228
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 380 EQERGCRPT--NATSSPLCSNRGTCICGVCECNKMED 276
E+ERG R T SP C +C+C C+ + D
Sbjct: 176 EEERGSRKVFRGCTRSPSCKGCTSCVCFGCKLCRFSD 212
>At4g34370.1 68417.m04883 IBR domain-containing protein similar to
SP|Q94981 Ariadne-1 protein (Ari-1) {Drosophila
melanogaster}; contains Pfam profile PF01485: IBR domain
Length = 597
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 8/63 (12%)
Frame = -2
Query: 207 LCSGHGTCVC-------GKCSCEPDYGGPACQCLKDTKVCMSP-ENNKICSGNGKCVCGQ 52
LC H C C KC E + K C P E N C+ +C+CGQ
Sbjct: 247 LCQAHSPCSCLMWELWRKKCRDESETINWITVHTKLCPKCYKPVEKNGGCN-LVRCICGQ 305
Query: 51 CVC 43
C C
Sbjct: 306 CFC 308
>At2g24860.1 68415.m02973 chaperone protein dnaJ-related similar to
Tsi1-interacting protein TSIP1 (GI:4337001) [Nicotiana
tabacum]
Length = 144
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNK---ICSGNGKCVCGQC 49
C+ G C C+ G L D +C P N ICSG G C C
Sbjct: 79 CNSKGHVECKWCA------GTGFFILGDNMLCQVPSRNTSCVICSGQGSASCSDC 127
>At1g67270.1 68414.m07656 hypothetical protein
Length = 506
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 338 PLCSNRGTCICGVCECNKMEDPTKVI 261
PLC RG CIC VC + +PT ++
Sbjct: 79 PLC--RGICICSVCRKAQGLEPTGIL 102
>At1g21210.1 68414.m02651 wall-associated kinase 4
Length = 738
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
Frame = -3
Query: 479 CSGEGVSACGV---CLCSPGRFGKSCECSAQGGVSVEQERGCRPTN--ATSSPL----CS 327
C G CGV C S G +C+C + + GC+ N T++P+ CS
Sbjct: 236 CGQVGEKKCGVNGICSNSASGIGYTCKCKGGFQGNPYLQNGCQDINECTTANPIHKHNCS 295
Query: 326 NRGTC 312
TC
Sbjct: 296 GDSTC 300
>At5g39970.1 68418.m04847 expressed protein low similarity to
up-regulated by thyroid hormone in tadpoles; expressed
specifically in the tail and only at metamorphosis;
membrane bound or extracellular protein; C-terminal
basic region [Xenopus laevis] GI:1234787
Length = 690
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = -2
Query: 237 NFTCDRYKGQLCSGHGTC----VCGKCSCEPDYGGPACQ 133
+F CDR K CSG C C + D G CQ
Sbjct: 289 SFNCDRVKWPECSGKCACNSDIDCDPAKLDSDNGATPCQ 327
>At5g06130.2 68418.m00682 chaperone protein dnaJ-related similar to
unknown protein (pir||T00468); contains Pfam PF00684 :
DnaJ central domain (4 repeats)
Length = 315
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKCVCGQCVC 43
CS G C+ P Q + TK C++ CSG GK +C C+C
Sbjct: 252 CSASGVCLSIDPITRPRATNQLMQ-VATTKRCLN------CSGAGKVMCPTCLC 298
>At5g06130.1 68418.m00681 chaperone protein dnaJ-related similar to
unknown protein (pir||T00468); contains Pfam PF00684 :
DnaJ central domain (4 repeats)
Length = 231
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -2
Query: 204 CSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGKCVCGQCVC 43
CS G C+ P Q + TK C++ CSG GK +C C+C
Sbjct: 168 CSASGVCLSIDPITRPRATNQLMQ-VATTKRCLN------CSGAGKVMCPTCLC 214
>At5g04045.1 68418.m00385 Expressed protein
Length = 97
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = -2
Query: 246 ECDNFTCDRYKGQLCSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNK-ICS--G 76
ECD+ C +C+ H C C S GG C ++D + P N+ IC G
Sbjct: 33 ECDSRGCRVGTHVICNEHHICTCAHGS---PIGG-QCDGVEDCDLSGCPPNSHVICDRIG 88
Query: 75 NGKCVC 58
C C
Sbjct: 89 GNFCTC 94
>At2g42000.1 68415.m05195 plant EC metallothionein-like family 15
protein 84 C-terminal residues identical to EC protein
homolog 1 (SP:P93746) {Arabidopsis thaliana}; contains
Pfam PF02068: Plant PEC family metallothionein profile;
Length = 115
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 12/73 (16%)
Frame = -3
Query: 473 GEGVSACG-VCLC-SPGRFGKSCECSAQGGVSVEQER---------GCRPTNATSSPLCS 327
G V+ C C C SP G SC C + + +Q GC P N + +
Sbjct: 38 GSSVAGCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCNCPKTQTQT 97
Query: 326 NRGTCICGV-CEC 291
+ C CG C C
Sbjct: 98 SAKGCTCGEGCTC 110
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,610,056
Number of Sequences: 28952
Number of extensions: 247091
Number of successful extensions: 976
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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