Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0975
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    27   0.65 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   4.6  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 26.6 bits (56), Expect = 0.65
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 107 F*IITVYCQSDPGSEARGWSCGVDC 33
           F I  +Y  S PG+   GW+CGV C
Sbjct: 396 FQISDIYWCSPPGN---GWACGVSC 417



 Score = 26.6 bits (56), Expect = 0.65
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 128 KDSGIY*F*IITVYCQSDPGSEARGWSCGVDCVEVNN 18
           +D G+  F I  +Y  S PG   +GW CG+ C ++ +
Sbjct: 704 EDHGL--FQISDIYWCSPPG---KGWVCGLSCADLED 735



 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 89  YCQSDPGSEARGWSCGVDCVEVNN 18
           Y  S PG   RGW CG+ C ++ +
Sbjct: 560 YWCSPPG---RGWVCGISCAQLRD 580


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 71  GSEARGWSCGVDCVEVNNK 15
           GS   GWS  VDCV ++ +
Sbjct: 460 GSMGVGWSLQVDCVYIDRR 478


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 71  GSEARGWSCGVDCVEVNNK 15
           GS   GWS  VDCV ++ +
Sbjct: 461 GSMGVGWSLQVDCVYIDRR 479


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 5   ITQFYCSLLHNRHRTTSP 58
           +   YC LL+NR RT  P
Sbjct: 706 LDSIYCKLLYNRGRTYVP 723


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,730
Number of Sequences: 2352
Number of extensions: 9072
Number of successful extensions: 55
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)