Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0975
         (630 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023897-1|ABA81831.1|  409|Drosophila melanogaster LP13955p pro...    29   5.2  
AY069479-1|AAL39624.1|  352|Drosophila melanogaster LD21637p pro...    29   5.2  
AE014297-459|AAN13376.1|  536|Drosophila melanogaster CG10277-PC...    29   5.2  
AE014297-458|AAN13375.1|  536|Drosophila melanogaster CG10277-PB...    29   5.2  
AE014297-457|AAF54124.1|  536|Drosophila melanogaster CG10277-PA...    29   5.2  

>BT023897-1|ABA81831.1|  409|Drosophila melanogaster LP13955p
           protein.
          Length = 409

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 355 GRVPQASTRGAASASYSTVGDAAVGTRQRVTRWRRG 248
           G+V  AS+ G A+ S S+V  AAV    R   +RRG
Sbjct: 194 GQVSSASSAGGAAGSSSSVAAAAVAGTTRHGTFRRG 229


>AY069479-1|AAL39624.1|  352|Drosophila melanogaster LD21637p
           protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 355 GRVPQASTRGAASASYSTVGDAAVGTRQRVTRWRRG 248
           G+V  AS+ G A+ S S+V  AAV    R   +RRG
Sbjct: 137 GQVSSASSAGGAAGSSSSVAAAAVAGTTRHGTFRRG 172


>AE014297-459|AAN13376.1|  536|Drosophila melanogaster CG10277-PC,
           isoform C protein.
          Length = 536

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 355 GRVPQASTRGAASASYSTVGDAAVGTRQRVTRWRRG 248
           G+V  AS+ G A+ S S+V  AAV    R   +RRG
Sbjct: 321 GQVSSASSAGGAAGSSSSVAAAAVAGTTRHGTFRRG 356


>AE014297-458|AAN13375.1|  536|Drosophila melanogaster CG10277-PB,
           isoform B protein.
          Length = 536

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 355 GRVPQASTRGAASASYSTVGDAAVGTRQRVTRWRRG 248
           G+V  AS+ G A+ S S+V  AAV    R   +RRG
Sbjct: 321 GQVSSASSAGGAAGSSSSVAAAAVAGTTRHGTFRRG 356


>AE014297-457|AAF54124.1|  536|Drosophila melanogaster CG10277-PA,
           isoform A protein.
          Length = 536

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 355 GRVPQASTRGAASASYSTVGDAAVGTRQRVTRWRRG 248
           G+V  AS+ G A+ S S+V  AAV    R   +RRG
Sbjct: 321 GQVSSASSAGGAAGSSSSVAAAAVAGTTRHGTFRRG 356


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,655,578
Number of Sequences: 53049
Number of extensions: 386634
Number of successful extensions: 807
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)