Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0973
         (637 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5143 Cluster: PREDICTED: hypothetical protein;...    34   2.5  
UniRef50_Q14865 Cluster: AT-rich interactive domain-containing p...    34   3.3  
UniRef50_O97287 Cluster: Putative uncharacterized protein MAL3P7...    33   5.8  
UniRef50_A2SMB2 Cluster: Proline dehydrogenase; n=1; Methylibium...    33   7.6  

>UniRef50_UPI00015B5143 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 1190

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +1

Query: 244 G*CTAARFGDRLEPRMPAAYAPRNVQTAHNVAETDYENASYHEYDEENASIE 399
           G  TAAR G R + R+P   +  N      +AETD  +  +HE + E +S E
Sbjct: 722 GSTTAARGGARPKGRLPDTTSTANKPKESKLAETDGLHMEFHEIESEESSSE 773


>UniRef50_Q14865 Cluster: AT-rich interactive domain-containing
           protein 5B; n=37; cellular organisms|Rep: AT-rich
           interactive domain-containing protein 5B - Homo sapiens
           (Human)
          Length = 1188

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
 Frame = +2

Query: 137 HGCVYTEILAAEGPGGLMATAAGRTLLSNAVLLVMLAS----------ALQRALATDSNR 286
           HG  YT +L + G  G+M+  A + LLS      + +S          + ++ +A D   
Sbjct: 670 HGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKKKLIARDDLC 729

Query: 287 GCLPHTHRGMYKPHTT*QRLTTKMRHITNMTKKMPQSKKTIHN 415
             L  TH G    H    R  + ++H+ +   K  + +KTI++
Sbjct: 730 SSLSQTHHGQSTDHMAVSR-PSVIQHVQSFRSKPSEERKTIND 771


>UniRef50_O97287 Cluster: Putative uncharacterized protein
           MAL3P7.15; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL3P7.15 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1844

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +1

Query: 310 RNVQTAHNVAETDYENASYHEYDEENASIEENNT 411
           + ++  +N++E+D  N SYH +D  + S EENNT
Sbjct: 13  QKIKNINNISESDETN-SYHSFDTYSKSEEENNT 45


>UniRef50_A2SMB2 Cluster: Proline dehydrogenase; n=1; Methylibium
           petroleiphilum PM1|Rep: Proline dehydrogenase -
           Methylibium petroleiphilum (strain PM1)
          Length = 527

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +3

Query: 240 CWLVHCSALWRPTRTADACRIRTAECTNRTQRSRD*LRKC--VISRI*RRKCLNRRKQYT 413
           CW   C+A WR   T  +C   T+  T R+  +R   R+C    SR  RR+C +   +  
Sbjct: 465 CWPTWCAACWRTAPTRRSC---TSWPTRRSMSTRCSRRRCRPRPSRASRRRCSSTAARGA 521

Query: 414 TR 419
           TR
Sbjct: 522 TR 523


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,678,597
Number of Sequences: 1657284
Number of extensions: 9236578
Number of successful extensions: 29572
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29552
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)