Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0973
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       26   1.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   1.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   3.5  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   4.6  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -1

Query: 166 CQNLRVDTSVVLAKAEIISSELPPCCK--TAFVNTAGLLPLI 47
           CQ L   + V L   + I  EL PCC+    + +T+   PLI
Sbjct: 50  CQPLSNISEVSLEPGQRIRRELDPCCEILRLYCDTSACPPLI 91


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 256 AARFGDRLEPRMPAAYAPRNVQTAHNVAETDYENASYHEYDEENASIEE 402
           +++ G  + P   A Y  R V+      E + E A   E +EE  S+EE
Sbjct: 348 SSQLGGPVSPASDAGY-DRRVKQEQRDEEGELEAAEEEEDEEEEISVEE 395


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -1

Query: 340  LLRCVRFVHSAVRMRQASAVRVGRQSALQCTSQH 239
            +  C RF    +++ ++  V VG  + +Q   QH
Sbjct: 985  MFHCPRFAEERLQLNESCRVEVGCSNLVQVMLQH 1018


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 249 VHCSALWRPTRTADACRIRTAECTNRT 329
           V CS++W    +      RTA C+ R+
Sbjct: 64  VPCSSIWSRPSSMRCAPARTASCSTRS 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,902
Number of Sequences: 2352
Number of extensions: 10183
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)