BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0973 (637 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 26 1.1 AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 25 1.5 AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 24 3.5 U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 24 4.6 >AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. Length = 1009 Score = 25.8 bits (54), Expect = 1.1 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = -1 Query: 166 CQNLRVDTSVVLAKAEIISSELPPCCK--TAFVNTAGLLPLI 47 CQ L + V L + I EL PCC+ + +T+ PLI Sbjct: 50 CQPLSNISEVSLEPGQRIRRELDPCCEILRLYCDTSACPPLI 91 >AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. Length = 679 Score = 25.4 bits (53), Expect = 1.5 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +1 Query: 256 AARFGDRLEPRMPAAYAPRNVQTAHNVAETDYENASYHEYDEENASIEE 402 +++ G + P A Y R V+ E + E A E +EE S+EE Sbjct: 348 SSQLGGPVSPASDAGY-DRRVKQEQRDEEGELEAAEEEEDEEEEISVEE 395 >AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase protein. Length = 1049 Score = 24.2 bits (50), Expect = 3.5 Identities = 9/34 (26%), Positives = 17/34 (50%) Frame = -1 Query: 340 LLRCVRFVHSAVRMRQASAVRVGRQSALQCTSQH 239 + C RF +++ ++ V VG + +Q QH Sbjct: 985 MFHCPRFAEERLQLNESCRVEVGCSNLVQVMLQH 1018 >U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles gambiae putativetubulin alpha chain mRNA, complete cds. ). Length = 91 Score = 23.8 bits (49), Expect = 4.6 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = +3 Query: 249 VHCSALWRPTRTADACRIRTAECTNRT 329 V CS++W + RTA C+ R+ Sbjct: 64 VPCSSIWSRPSSMRCAPARTASCSTRS 90 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 573,902 Number of Sequences: 2352 Number of extensions: 10183 Number of successful extensions: 20 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 62305095 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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