Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0973
         (637 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX641020-1|CAE46013.1|  602|Homo sapiens hypothetical protein pr...    34   0.49 
BC036831-1|AAH36831.1|  716|Homo sapiens ARID5B protein protein.       34   0.49 
AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition f...    34   0.49 
AL671972-1|CAH72685.1|  945|Homo sapiens modulator recognition f...    34   0.49 
AL451136-4|CAI13094.1|  282|Homo sapiens methylmalonic aciduria ...    30   7.9  

>BX641020-1|CAE46013.1|  602|Homo sapiens hypothetical protein
           protein.
          Length = 602

 Score = 33.9 bits (74), Expect = 0.49
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
 Frame = +2

Query: 137 HGCVYTEILAAEGPGGLMATAAGRTLLSNAVLLVMLAS----------ALQRALATDSNR 286
           HG  YT +L + G  G+M+  A + LLS      + +S          + ++ +A D   
Sbjct: 84  HGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKKKLIARDDLC 143

Query: 287 GCLPHTHRGMYKPHTT*QRLTTKMRHITNMTKKMPQSKKTIHN 415
             L  TH G    H    R  + ++H+ +   K  + +KTI++
Sbjct: 144 SSLSQTHHGQSTDHMAVSR-PSVIQHVQSFRSKPSEERKTIND 185


>BC036831-1|AAH36831.1|  716|Homo sapiens ARID5B protein protein.
          Length = 716

 Score = 33.9 bits (74), Expect = 0.49
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
 Frame = +2

Query: 137 HGCVYTEILAAEGPGGLMATAAGRTLLSNAVLLVMLAS----------ALQRALATDSNR 286
           HG  YT +L + G  G+M+  A + LLS      + +S          + ++ +A D   
Sbjct: 198 HGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKKKLIARDDLC 257

Query: 287 GCLPHTHRGMYKPHTT*QRLTTKMRHITNMTKKMPQSKKTIHN 415
             L  TH G    H    R  + ++H+ +   K  + +KTI++
Sbjct: 258 SSLSQTHHGQSTDHMAVSR-PSVIQHVQSFRSKPSEERKTIND 299


>AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition
           factor 2 (MRF2) protein.
          Length = 1188

 Score = 33.9 bits (74), Expect = 0.49
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
 Frame = +2

Query: 137 HGCVYTEILAAEGPGGLMATAAGRTLLSNAVLLVMLAS----------ALQRALATDSNR 286
           HG  YT +L + G  G+M+  A + LLS      + +S          + ++ +A D   
Sbjct: 670 HGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKKKLIARDDLC 729

Query: 287 GCLPHTHRGMYKPHTT*QRLTTKMRHITNMTKKMPQSKKTIHN 415
             L  TH G    H    R  + ++H+ +   K  + +KTI++
Sbjct: 730 SSLSQTHHGQSTDHMAVSR-PSVIQHVQSFRSKPSEERKTIND 771


>AL671972-1|CAH72685.1|  945|Homo sapiens modulator recognition
           factor 2 (MRF2) protein.
          Length = 945

 Score = 33.9 bits (74), Expect = 0.49
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
 Frame = +2

Query: 137 HGCVYTEILAAEGPGGLMATAAGRTLLSNAVLLVMLAS----------ALQRALATDSNR 286
           HG  YT +L + G  G+M+  A + LLS      + +S          + ++ +A D   
Sbjct: 427 HGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKKKLIARDDLC 486

Query: 287 GCLPHTHRGMYKPHTT*QRLTTKMRHITNMTKKMPQSKKTIHN 415
             L  TH G    H    R  + ++H+ +   K  + +KTI++
Sbjct: 487 SSLSQTHHGQSTDHMAVSR-PSVIQHVQSFRSKPSEERKTIND 528


>AL451136-4|CAI13094.1|  282|Homo sapiens methylmalonic aciduria
           (cobalamin deficiency) cblC type, with homocystinuria
           protein.
          Length = 282

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 204 PAAVAIRPPGPSAARISV*THPWYLQKLKLFLQSCH 97
           P A  +  PGP+ A + + T   + + LK FLQSCH
Sbjct: 36  PPAFHLPLPGPTLAFLVLSTPAMFDRALKPFLQSCH 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,466,395
Number of Sequences: 237096
Number of extensions: 1476214
Number of successful extensions: 4197
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4148
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)