Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0973
         (637 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001514-1|AAN71269.1|  572|Drosophila melanogaster LD44245p pro...    31   1.7  
AJ252124-1|CAB64386.1|  571|Drosophila melanogaster SoxNeuro pro...    31   1.7  
AE014134-1564|AAF52712.1|  572|Drosophila melanogaster CG18024-P...    31   1.7  

>BT001514-1|AAN71269.1|  572|Drosophila melanogaster LD44245p
           protein.
          Length = 572

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 21/90 (23%), Positives = 39/90 (43%)
 Frame = +2

Query: 164 AAEGPGGLMATAAGRTLLSNAVLLVMLASALQRALATDSNRGCLPHTHRGMYKPHTT*QR 343
           AA       A AAG   L++ + +  L    +  L   ++   L   H+ M +     Q+
Sbjct: 472 AAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQ-----QQ 526

Query: 344 LTTKMRHITNMTKKMPQSKKTIHNQKQNHH 433
                +H++   +++PQ   T+  Q+Q HH
Sbjct: 527 QHLPQQHLSQQHQQIPQQHHTMQQQQQQHH 556


>AJ252124-1|CAB64386.1|  571|Drosophila melanogaster SoxNeuro
           protein.
          Length = 571

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 21/90 (23%), Positives = 39/90 (43%)
 Frame = +2

Query: 164 AAEGPGGLMATAAGRTLLSNAVLLVMLASALQRALATDSNRGCLPHTHRGMYKPHTT*QR 343
           AA       A AAG   L++ + +  L    +  L   ++   L   H+ M +     Q+
Sbjct: 471 AAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQ-----QQ 525

Query: 344 LTTKMRHITNMTKKMPQSKKTIHNQKQNHH 433
                +H++   +++PQ   T+  Q+Q HH
Sbjct: 526 QHLPQQHLSQQHQQIPQQHHTMQQQQQQHH 555


>AE014134-1564|AAF52712.1|  572|Drosophila melanogaster CG18024-PA
           protein.
          Length = 572

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 21/90 (23%), Positives = 39/90 (43%)
 Frame = +2

Query: 164 AAEGPGGLMATAAGRTLLSNAVLLVMLASALQRALATDSNRGCLPHTHRGMYKPHTT*QR 343
           AA       A AAG   L++ + +  L    +  L   ++   L   H+ M +     Q+
Sbjct: 472 AAAAAAAAAAAAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQ-----QQ 526

Query: 344 LTTKMRHITNMTKKMPQSKKTIHNQKQNHH 433
                +H++   +++PQ   T+  Q+Q HH
Sbjct: 527 QHLPQQHLSQQHQQIPQQHHTMQQQQQQHH 556


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,906,154
Number of Sequences: 53049
Number of extensions: 464645
Number of successful extensions: 1842
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)