Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0971
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39876| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.049
SB_51569| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6) 30 1.4
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 30 1.8
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053) 29 4.2
SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09) 29 4.2
SB_13838| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_2315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) 28 7.4
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_22514| Best HMM Match : Drf_FH1 (HMM E-Value=1.8) 27 9.7
>SB_39876| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 35.1 bits (77), Expect = 0.049
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPTAS 181
T LPT +PT PT EPT +PT S
Sbjct: 629 TTELPTTKQPTTELPTTQEPTTERPTPS 656
Score = 34.3 bits (75), Expect = 0.085
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 86 DTTATDSLPTASEPTASQPTASEPTASQPTASQ 184
D T + PT+ +P QPT +PT PT Q
Sbjct: 595 DIAVTQAPPTSQQPITEQPTTKQPTTELPTTKQ 627
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPTASQ 184
T LPT +PT PT +PT PT +
Sbjct: 619 TTELPTTKQPTTELPTTKQPTTELPTTQE 647
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPT 175
T P +PT QPT PT QPT
Sbjct: 604 TSQQPITEQPTTKQPTTELPTTKQPT 629
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPT 175
T PT PT QPT PT QPT
Sbjct: 614 TTKQPTTELPTTKQPTTELPTTKQPT 639
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 110 PTASEPTASQPTASEPTASQPTASQ 184
PT +PT PT +PT PT Q
Sbjct: 613 PTTKQPTTELPTTKQPTTELPTTKQ 637
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPTASQ 184
T PT PT QPT PT +PT +
Sbjct: 624 TTKQPTTELPTTKQPTTELPTTQEPTTER 652
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 95 ATDSLPTASEPTASQPTASEPTASQPT 175
A D T + PT+ QP +PT QPT
Sbjct: 593 ACDIAVTQAPPTSQQPITEQPTTKQPT 619
>SB_51569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPTA 178
T +PT PTA T PTA PTA
Sbjct: 602 TTQMPTTQSPTAQMSTTQSPTAQSPTA 628
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPTA 178
T LPT PT PTA T PTA
Sbjct: 597 TTQLPTTQMPTTQSPTAQMSTTQSPTA 623
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPTA 178
T LPTA T PT PT PTA
Sbjct: 643 TTQLPTAQMSTTQSPTTQLPTTQSPTA 669
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPTA 178
T + T PT PT PTA PTA
Sbjct: 648 TAQMSTTQSPTTQLPTTQSPTAQSPTA 674
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPTASQPT 175
T LPT PT PT PTA T
Sbjct: 592 TTQLPTTQLPTTQMPTTQSPTAQMST 617
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 95 ATDSLPTASEPTASQPTASEPTASQPT 175
+T PT PT PTA PTA T
Sbjct: 652 STTQSPTTQLPTTQSPTAQSPTAQMST 678
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +2
Query: 89 TTATDSLPTASEPTASQPTASEPTASQPT 175
T AT PT PTA PT PTA PT
Sbjct: 95 TPATTPTPTKPTPTAHTPTTPTPTAHTPT 123
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 92 TATDSLPTASEPTASQPTASEPTASQP 172
T T PTA PT PTA PT P
Sbjct: 101 TPTKPTPTAHTPTTPTPTAHTPTKPTP 127
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 92 TATDSLPTASEPTASQPTASEPTASQPTA 178
T T PTA PT P PT PTA
Sbjct: 111 TPTTPTPTAHTPTKPTPKTPTPTTPTPTA 139
>SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 86 DTTATDSLPTASEPTASQPTASEPTASQP 172
DTT T S P + PTAS P + P A+ P
Sbjct: 207 DTTLTASSPVETTPTASPPVKTTPLAATP 235
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 86 DTTATDSLPTASEPTASQPTASEPTASQP 172
DTT T S P + TAS P + PTAS P
Sbjct: 197 DTTLTASSPVDTTLTASSPVETTPTASPP 225
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 89 TTATDSLPTASEPTASQPTASEPTASQPTAS 181
+T D+ TAS P + TAS P + PTAS
Sbjct: 193 STPVDTTLTASSPVDTTLTASSPVETTPTAS 223
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 89 TTATDSLPTASEPTASQPTASEPTASQPTASQ 184
++ ++ PTAS P + P A+ P + PTA +
Sbjct: 213 SSPVETTPTASPPVKTTPLAATPVYATPTAPE 244
>SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 110 PTASEPTASQPTASEPTASQPTA 178
PTA PTA++PTA PTA PTA
Sbjct: 941 PTAYCPTANRPTAYCPTAYLPTA 963
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2
Query: 110 PTASEPTASQPTASEPTASQPTA 178
PTA+ PTA PTA PTA PTA
Sbjct: 946 PTANRPTAYCPTAYLPTAYCPTA 968
>SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPT-ASQPTAS 181
+D P AS PT SQ + SEPT S+P +S
Sbjct: 414 SDPAPGASSPTTSQSSVSEPTPTSKPKSS 442
>SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6)
Length = 298
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASEPT-ASQPTAS 181
+D P AS PT SQ + SEPT S+P +S
Sbjct: 78 SDPAPGASSPTTSQSSVSEPTPTSKPKSS 106
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 598 RERRTRHVRTLERHKLRELRHNQRGRQRERA 506
R+ R R VR E ++ REL ++ R+RERA
Sbjct: 523 RQERDRPVRDRETYRDRELERDRADRERERA 553
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 625 ETERPQSCWRERRTRHVRTLERHKLRELRHNQRGRQRER 509
+ +R + R+R+ + R +R + R+ RH QR RQR+R
Sbjct: 20 QRQRQRQRQRQRQRQRQRQRQRQRQRQ-RHRQRQRQRQR 57
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 625 ETERPQSCWRERRTRHVRTLERHKLRELRHNQRGRQRER 509
+ +R + R+R+ + R +RH+ R+ R QR RQR+R
Sbjct: 26 QRQRQRQRQRQRQRQRQRQRQRHRQRQ-RQRQRQRQRQR 63
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASE-PTASQPTASQ 184
T +LP+ +PT +Q T + P+ QPT +Q
Sbjct: 210 TTTLPSTKQPTTTQQTTTTIPSTKQPTTTQ 239
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 104 SLPTASEPTASQPTASEPTASQPTASQ 184
+L T +PT Q T + P+ QPT +Q
Sbjct: 181 ALTTTKQPTTQQTTTNLPSTRQPTTNQ 207
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 98 TDSLPTASEPTASQPTASE-PTASQPTASQ 184
T +LP+ +PT +Q T + P+ QPT Q
Sbjct: 242 TTTLPSTKQPTTTQQTTTTLPSTKQPTTPQ 271
>SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053)
Length = 885
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1
Query: 177 AVGCDAVGSEAVGCEAVGSEAVGNESVAVV 88
AVG AVG+ AVG AVG AVG +V V
Sbjct: 204 AVGAVAVGAIAVGIVAVGVVAVGAIAVGFV 233
>SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09)
Length = 533
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 110 PTASEPTASQPTASEPTASQPTAS 181
PT+ EPT + T++E T+SQ T S
Sbjct: 229 PTSPEPTTRRSTSTESTSSQSTPS 252
>SB_13838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +2
Query: 110 PTASEPTASQP---TASEPTASQPTASQ 184
PT +P + +P TA++PT QPT Q
Sbjct: 32 PTTQQPNSQRPNDLTANDPTTKQPTTQQ 59
>SB_2315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 28 CDAMRCDAMRCDAMRCDAMRCDAM 51
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 33 CDAMRCDAMRCDAMRCDAMRCDAM 56
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 38 CDAMRCDAMRCDAMRCDAMRCDAM 61
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 43 CDAMRCDAMRCDAMRCDAMRCDAM 66
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 48 CDAMRCDAMRCDAMRCDAMRCDAM 71
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 53 CDAMRCDAMRCDAMRCDAMRCDAM 76
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 58 CDAMRCDAMRCDAMRCDAMRCDAM 81
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 63 CDAMRCDAMRCDAMRCDAMRCDAM 86
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 68 CDAMRCDAMRCDAMRCDAMRCDAM 91
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 73 CDAMRCDAMRCDAMRCDAMRCDAM 96
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 8 CDAMRCDAMRCDAMRCDAMLCDAM 31
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 13 CDAMRCDAMRCDAMLCDAMRCDAM 36
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 18 CDAMRCDAMLCDAMRCDAMRCDAM 41
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 183 CDAVGCDAVGSEAVGCEAVGSEAV 112
CDA+ CDA+ +A+ C+A+ +A+
Sbjct: 23 CDAMLCDAMRCDAMRCDAMRCDAM 46
>SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066)
Length = 361
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 104 SLPTASEPTASQPTASEPTASQPTA 178
S PTA P S PTA P S PTA
Sbjct: 56 SPPTAVHPCHSPPTAVRPCHSPPTA 80
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 616 RPQSCWRERRTRHVRTLERHKLRELRHNQRGRQRERA 506
R ++ RER R ER +L +R +R ++ ERA
Sbjct: 610 RERALERERERERERERERRRLEYMREQRRRQEEERA 646
>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 89 TTATDSLPTASEPTASQPTASEPTASQPTASQ 184
+T+T + T + T + PT + PT + PT ++
Sbjct: 803 STSTSAATTTAPATTTPPTTAPPTTAPPTTTK 834
>SB_22514| Best HMM Match : Drf_FH1 (HMM E-Value=1.8)
Length = 336
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 107 LPTASEPTASQPTASEPTASQPT 175
LPT++ PT + P+ S T S PT
Sbjct: 236 LPTSATPTGTTPSVSPATYSSPT 258
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,184,070
Number of Sequences: 59808
Number of extensions: 115233
Number of successful extensions: 871
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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