Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0970
         (596 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g26610.1 68415.m03193 expressed protein  ; expression support...    31   0.44 
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A...    30   1.0  
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A...    30   1.0  
At3g29075.1 68416.m03637 glycine-rich protein                          30   1.3  
At5g15680.1 68418.m01834 expressed protein                             29   2.4  
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR...    28   4.1  
At1g29830.1 68414.m03646 hypothetical protein                          28   4.1  
At1g29820.1 68414.m03645 expressed protein                             28   4.1  
At5g15470.1 68418.m01811 glycosyl transferase family 8 protein c...    27   9.5  
At3g58790.1 68416.m06552 glycosyl transferase family 8 protein c...    27   9.5  
At3g52690.1 68416.m05804 hypothetical protein predicted proteins...    27   9.5  
At3g01040.1 68416.m00005 glycosyl transferase family 8 protein c...    27   9.5  
At1g10760.1 68414.m01231 starch excess protein (SEX1) identical ...    27   9.5  

>At2g26610.1 68415.m03193 expressed protein  ; expression supported by
            MPSS
          Length = 1249

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -2

Query: 340  LQSGVGMYLQ*GAFSSKTATFRKANFAAS*CVAVLNCYSTVA 215
            L  GV +Y+  GAF    A FRKA  A +  + ++ C  T+A
Sbjct: 1170 LWRGVILYVAVGAFEEALAVFRKAERAETAAIFIMACRETLA 1211


>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 390

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +3

Query: 273 LRNVAVLELKAPYWRYIPTPLWSKYVNNMNFFVEICSRYINEALERL--KTKKVTSENDL 446
           +R  A L  + P   YIP+  W   +  ++  +E+  +  +E LER+  + ++   E   
Sbjct: 207 VRTFAALLGEFPVGEYIPSLSWIDRIRGLDHKMEVVDKRFDEFLERVVKEHEEADKETRS 266

Query: 447 SLLERVLRSEGD 482
            L++++L  + D
Sbjct: 267 DLVDKLLTIQSD 278


>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 497

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +3

Query: 273 LRNVAVLELKAPYWRYIPTPLWSKYVNNMNFFVEICSRYINEALERL--KTKKVTSENDL 446
           +R  A L  + P   YIP+  W   +  ++  +E+  +  +E LER+  + ++   E   
Sbjct: 207 VRTFAALLGEFPVGEYIPSLSWIDRIRGLDHKMEVVDKRFDEFLERVVKEHEEADKETRS 266

Query: 447 SLLERVLRSEGD 482
            L++++L  + D
Sbjct: 267 DLVDKLLTIQSD 278


>At3g29075.1 68416.m03637 glycine-rich protein 
          Length = 294

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 407 KAEDEESDVRERSLAARTGSEERRRSKDSHHNGVD 511
           K  D + D +++    R   +E+++ KD HH G D
Sbjct: 260 KHYDNDDDEKKKKKDHRDDDDEKKKKKDKHHKGHD 294


>At5g15680.1 68418.m01834 expressed protein 
          Length = 2151

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +1

Query: 40   TVKKYVAPIELVTEDFIKYMVDARDENGDLPHEFDNDIHRWSLECIGRVALDVRLGCLSP 219
            TV +   P   +    ++ MVDA    GDL   +  +  +W++EC  R      L C S 
Sbjct: 1651 TVVRTDLPSAALLSALVQSMVDAIFFQGDLRETWGTEALKWAMECTSR-----HLACRSH 1705

Query: 220  QL 225
            Q+
Sbjct: 1706 QI 1707


>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1193

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +3

Query: 294 ELKAPYWRYIPTPLW-SKYVNNMNFFVEICSRYIN-EAL-ERLKTKKVTSENDLS 449
           +L+  +W Y P  LW SK+  + NF VE+  R  N E L E++   K     DLS
Sbjct: 601 KLRVLHWNYCPLRLWPSKF--SANFLVELVMRGNNFEKLWEKILPLKSLKRMDLS 653


>At1g29830.1 68414.m03646 hypothetical protein
          Length = 570

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 279 NVAVLELKAPYWRYIPTPLWSKYVNNMNFFVE 374
           +V V +L APYW     P W  ++   N FVE
Sbjct: 141 DVPVTDLAAPYWERPGGPTWWCHLTAGNSFVE 172


>At1g29820.1 68414.m03645 expressed protein
          Length = 540

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 279 NVAVLELKAPYWRYIPTPLWSKYVNNMNFFVE 374
           +V V +L APYW     P W  ++   N FVE
Sbjct: 148 DVPVTDLAAPYWERPGGPTWWCHLTAGNSFVE 179


>At5g15470.1 68418.m01811 glycosyl transferase family 8 protein
           contains Pfam profile: PF01501 glycosyl transferase
           family 8
          Length = 532

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 PLWSKYVNNMNFFVEIC 380
           P W+KYVN  N F++ C
Sbjct: 512 PFWTKYVNYSNDFIKNC 528


>At3g58790.1 68416.m06552 glycosyl transferase family 8 protein
           contains Pfam profile: PF01501 glycosyl transferase
           family 8; general stress protein gspA, Bacillus
           subtilis, PIR:S16423
          Length = 540

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
 Frame = +3

Query: 273 LRNVAVLELKAPY--WRYIPTP----LWSKYVNNMNFFVEIC 380
           L++ +VL    P   W  I  P    LW +YVN+ + FV  C
Sbjct: 495 LKSASVLHFSGPAKPWLEISNPEVRSLWYRYVNSSDIFVRKC 536


>At3g52690.1 68416.m05804 hypothetical protein predicted proteins,
           Arabidopsis thaliana
          Length = 299

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 212 RQPSRTSKATRPIHSKDH 159
           RQ    S +TRPIHSK+H
Sbjct: 253 RQLKNVSFSTRPIHSKEH 270


>At3g01040.1 68416.m00005 glycosyl transferase family 8 protein
           contains Pfam profile: PF01501 glycosyl transferase
           family 8
          Length = 533

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 PLWSKYVNNMNFFVEIC 380
           P W+KYVN  N F++ C
Sbjct: 513 PFWTKYVNYSNDFIKNC 529


>At1g10760.1 68414.m01231 starch excess protein (SEX1) identical to
            SEX1 [Arabidopsis thaliana] GI:12044358; supporting cDNA
            gi|12044357|gb|AF312027.1|AF312027
          Length = 1399

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +3

Query: 276  RNVAVLELKAPYWRYIPTPLWSKYVNNMNFFVEICSRYINEAL--ERLKTKKVTSENDLS 449
            RN+  L+ K P W  IPT +   +      F ++ S   N+A+  + L  KK   E D  
Sbjct: 1098 RNIGYLKGKVPSWVGIPTSVALPF----GVFEKVISEKANQAVNDKLLVLKKTLDEGDQG 1153

Query: 450  LLERV 464
             L+ +
Sbjct: 1154 ALKEI 1158


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,410,096
Number of Sequences: 28952
Number of extensions: 242262
Number of successful extensions: 807
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)