Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0969
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_49879| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_41376| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_2389| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29) 31 0.93
SB_12278| Best HMM Match : PAN (HMM E-Value=0.044) 31 0.93
SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_36859| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_18092| Best HMM Match : Ly-6_related (HMM E-Value=1.5) 30 1.6
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 30 1.6
SB_7757| Best HMM Match : PAN (HMM E-Value=0.12) 29 2.1
SB_6923| Best HMM Match : PAN (HMM E-Value=0.038) 29 2.1
SB_25269| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_9884| Best HMM Match : zf-BED (HMM E-Value=2.8) 29 2.8
SB_51378| Best HMM Match : PAN (HMM E-Value=0.00096) 29 3.7
SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0) 29 3.7
SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31) 29 3.7
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 29 3.7
SB_13531| Best HMM Match : PAN (HMM E-Value=0.0041) 29 3.7
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 29 3.7
SB_21436| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-13) 28 4.9
SB_56808| Best HMM Match : EGF (HMM E-Value=0.00024) 28 4.9
SB_3035| Best HMM Match : PAN (HMM E-Value=2.9e-08) 28 4.9
SB_39996| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_14044| Best HMM Match : EGF_CA (HMM E-Value=4.1e-13) 28 6.5
SB_7554| Best HMM Match : zf-CXXC (HMM E-Value=6.5e-08) 28 6.5
SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_7922| Best HMM Match : SMC_C (HMM E-Value=1.5e-08) 27 8.6
SB_47883| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-14) 27 8.6
SB_46138| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_43041| Best HMM Match : F5_F8_type_C (HMM E-Value=2.3e-10) 27 8.6
SB_41898| Best HMM Match : EGF_CA (HMM E-Value=3.9e-14) 27 8.6
SB_35350| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_30074| Best HMM Match : PAN (HMM E-Value=3.3e-07) 27 8.6
SB_12383| Best HMM Match : EGF_CA (HMM E-Value=2.5e-12) 27 8.6
SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 401 DRVRGYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
D V G HLK H + +H + C C + +C+S NYN KT C
Sbjct: 5 DLVPGMHLKHHLESSHKDITEDTCSIRCYLSD--MCQSYNYNYKTKTC 50
>SB_49879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 763
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 395 VRGYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTG 264
++G L GH H+V C LC+G + C+S NY ++ G
Sbjct: 419 IKGKSLAGHVVSAHSVNLNADCALLCIGHRK--CQSFNYQSEGG 460
>SB_41376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 404 FDRVR-GYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
FD R G +L H HT + C C G + C+S NYN+ T +C
Sbjct: 77 FDTRRDGKYLASHVIANHTAEAASNCRYHCYGSDR--CQSVNYNSVTRQC 124
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 332 CLDLCLGENEFVCRSANYNNKTGEC 258
CL++C EN+ C S NY +KTG C
Sbjct: 1080 CLEVC--ENDVFCESYNYYHKTGAC 1102
>SB_2389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 363
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 404 FDRVRGYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANY 279
F V G+ LK H K G ++C+ C G+++ C+S NY
Sbjct: 187 FKSVSGFRLKNHAFKAVKTGELKLCIRAC-GDDQ-RCKSINY 226
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 88 HVLIYGINSLKNTSTHFFKLAQFCWLFNAVVLQIVGVFV*LKSVGSRQGDTVH 246
+VL+ ++ LKN T F +LA+ C+L N + I F+ + Q DT H
Sbjct: 1124 NVLVGTLDCLKNPVTAFVRLAKGCYLGNVTEVAIPVRFLFVMLGPETQSDTYH 1176
>SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29)
Length = 334
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 389 GYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
G+HL VG C LC + E C S NY+ K G C
Sbjct: 3 GHHLLASHYDETDVGELWECYKLCYDDKEN-CASINYDMKNGRC 45
>SB_12278| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 97
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 389 GYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
G+HL VG C LC + E C S NY+ K G C
Sbjct: 25 GHHLLASHYDETDVGELWECYKLCYDDKEN-CASINYDMKNGRC 67
>SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 204 NEDTDYLENNCVEEPTKLCEFKKMGGRILKTVDSVYQDVQ 85
N T L+ C E K+ EF+K+ G ++ VD + ++V+
Sbjct: 24 NTQTQELKEECKEFVDKIAEFQKIVGGFIEMVDGLAKEVE 63
>SB_36859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -1
Query: 346 DLGRCALTFVSAKTNLFADLRTITIKPASVCL*HGPYHLGGNQRFSIKRRHRLF 185
D GR LT+ S+ T LF + RT T++P + Y + N S K R LF
Sbjct: 17 DQGRVDLTYESSMTRLFREGRTETVRPCTNESTRFVYGM-VNPELSKKERRELF 69
>SB_18092| Best HMM Match : Ly-6_related (HMM E-Value=1.5)
Length = 139
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -1
Query: 346 DLGRCALTFVSAKTNLFADLRTITIKPASVCL*HGPYHLGGNQRFSIKRRHRLF 185
D GR LT+ S+ T LF + RT T++P + Y + N S K R LF
Sbjct: 68 DQGRVDLTYESSMTRLFREGRTETVRPCTNESTRFVYGM-VNPELSKKERRELF 120
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 398 RVRGYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
R+ G +LK H T V C C ++ C+S NY+ +TG C
Sbjct: 6 RIEGKYLKDHVIGTFKVDKLSNCDVKCYMTDK--CQSVNYDQRTGLC 50
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/26 (38%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = -1
Query: 580 QCHANDTCRAVNYE--TGLCVLFSSD 509
+C+ D C++VNY+ TGLC + +++
Sbjct: 31 KCYMTDKCQSVNYDQRTGLCEMSATN 56
>SB_7757| Best HMM Match : PAN (HMM E-Value=0.12)
Length = 80
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 350 VGSRQMCLDLCLGENEFVCRSANYNNKTGECVSLTWT 240
VG C LC + E C S NY+ K G C +T T
Sbjct: 16 VGELWECYKLCYDDKEN-CASINYDMKKGRCKRMTVT 51
>SB_6923| Best HMM Match : PAN (HMM E-Value=0.038)
Length = 95
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 350 VGSRQMCLDLCLGENEFVCRSANYNNKTGECVSLTWT 240
VG C LC + E C S NY+ K G C +T T
Sbjct: 16 VGELWECYKLCYDDKEN-CASINYDMKKGRCKRMTVT 51
>SB_25269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 422 CERAWCFDRVRGYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
CE+ + V G L G K V + +C D C + + C+S NYN T C
Sbjct: 438 CEK---IESVNGIRLTGLSFKAFQVENIGICNDNC--DTDEKCKSINYNKVTKRC 487
>SB_9884| Best HMM Match : zf-BED (HMM E-Value=2.8)
Length = 129
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 464 FTIYAQKSCLGVRPCERAWCFDRVRGYHLKGHGKKTHTV 348
FT C G + C+ C D V+ +++K H KTH V
Sbjct: 25 FTQCQGTQCQGTQ-CQGTQCQDNVKVHNVKTHNVKTHNV 62
>SB_51378| Best HMM Match : PAN (HMM E-Value=0.00096)
Length = 279
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -1
Query: 577 CHANDTCRAVNY--ETGLCVLFSSD 509
C AND+CR+ N+ E LC L +SD
Sbjct: 44 CFANDSCRSYNFCQELELCQLSNSD 68
>SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 768
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 350 VGSRQMCLDLCLGENEFVCRSANYNNKTGECVSLTWT 240
VG C +C + E C S NY+ K G C +T T
Sbjct: 560 VGELWECYKICYDDKEN-CASINYDMKKGRCKRMTVT 595
>SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31)
Length = 974
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -1
Query: 577 CHANDTCRAVNY--ETGLCVLFSSD 509
C AND+CR+ N+ E LC L +SD
Sbjct: 82 CFANDSCRSYNFCQELELCQLSNSD 106
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 383 HLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
HLK H + +H + C C + +C+S NYN KT C
Sbjct: 2 HLKHHLETSHKNITEDTCSIRCFLSD--MCQSYNYNYKTKTC 41
>SB_13531| Best HMM Match : PAN (HMM E-Value=0.0041)
Length = 87
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 389 GYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGECV 255
G L+GH T V C D C + + + Y+ K G CV
Sbjct: 18 GMALQGHLISTIKVNDLMQCFDSCQSMSSCLSINFQYSRKEGTCV 62
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = -3
Query: 398 RVRGYHLKGHGK-----KTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
++RGY + + KT + + + C C E F CRS YN +C
Sbjct: 870 KIRGYRMNHEARVLSRQKTLSSQTPEQCAASCEQEVTFPCRSFEYNRANKDC 921
>SB_21436| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-13)
Length = 240
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 389 GYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
G+ L + +VG C LC + E C S NY+ K G C
Sbjct: 3 GHSLLASPYEETSVGELWECYKLCYDDKEN-CASINYDMKKGRC 45
>SB_56808| Best HMM Match : EGF (HMM E-Value=0.00024)
Length = 164
Score = 28.3 bits (60), Expect = 4.9
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = -3
Query: 371 HGKKTHTVGSRQMCLDLCLGENEFVCRSANYN---NKTGECVSLTWTVSPWREPTLFN-Q 204
H KK S+ C CL ++ C S NY + G C T+ V + N +
Sbjct: 47 HVKKRLQGQSQMSCSQRCLQQDW--CISVNYEVSRPEGGACELNTYGVEMMADANPDNPE 104
Query: 203 TKTPTIWRTTALKSQQNCASLKKWVDVF 120
+T T W + L+S Q ASL++ D F
Sbjct: 105 FETKTEWIYSQLRSAQFTASLQECRDNF 132
>SB_3035| Best HMM Match : PAN (HMM E-Value=2.9e-08)
Length = 240
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 580 QCHANDTCRAVNYETGLCVLFSSD 509
+C N+ CR+ NY T C L SD
Sbjct: 58 RCFMNNLCRSYNYNTTPCQLSDSD 81
>SB_39996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 320 CLGENEFVCRSANYNNKTGECVSLTW 243
C+ NEF CR + N+ GE W
Sbjct: 84 CVDANEFKCRDGEWQNQEGERPKKDW 109
>SB_14044| Best HMM Match : EGF_CA (HMM E-Value=4.1e-13)
Length = 184
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Frame = -1
Query: 580 QCHANDTCRAVNYE----TGLCVLFSS 512
QC+ N CRAVNY+ G C L S+
Sbjct: 55 QCYLNQACRAVNYKKRANLGSCELLSA 81
>SB_7554| Best HMM Match : zf-CXXC (HMM E-Value=6.5e-08)
Length = 343
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -2
Query: 462 HYIRSKILFGSSSVRTRLVLR*SARLPPQGARQENTHRWISA--DVP*PLSRRKRICLQI 289
++ S+ LFG S TR ++ PP+ R E+ + +S+ D + R+KR +
Sbjct: 93 YHTASRTLFGLRSSITRSMMGAGTEEPPKSKRGEHREKRMSSVPDYDESVPRKKRRRCGV 152
Query: 288 CE 283
CE
Sbjct: 153 CE 154
>SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1301
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 315 ETKVKAHLPRSNGVCFLAVPLEVVASHSIEAPGAFARTNSQTRFLSV 455
E +K H P NGVC + H +EA G R ++ F V
Sbjct: 1065 ENTLKQH-PDLNGVCIVHCETSTGVIHPVEAVGKLVRMHTPNAFFFV 1110
>SB_7922| Best HMM Match : SMC_C (HMM E-Value=1.5e-08)
Length = 493
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 383 HLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
HL GH + + R+ C+ LC C S NY G C
Sbjct: 419 HLTGHVMSSQSGLDRRACMVLC--ARTPTCASFNYQRSGGTC 458
>SB_47883| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-14)
Length = 265
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 389 GYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
G++L VG C LC + E C S NY+ K G C
Sbjct: 25 GHYLLASPYDETGVGELWECYKLCYDDKEN-CASINYDMKKGRC 67
>SB_46138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = -1
Query: 421 ANAPGASIECEATTSRGTARKHTPLDLGRCALTFVSAKTNLFADLRTITIK-PASVCL 251
A GA +R D+ RC + + LFA+L + + PA VCL
Sbjct: 404 APCSGALSAAGVVVTRSVTATLASADVRRCFCRYAPPPSRLFAELSLLNLNLPAKVCL 461
>SB_43041| Best HMM Match : F5_F8_type_C (HMM E-Value=2.3e-10)
Length = 234
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 389 GYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
G++L VG C LC + E C S NY+ K G C
Sbjct: 25 GHYLLASPYDETGVGELWECYKLCYDDKEN-CASINYDMKKGRC 67
>SB_41898| Best HMM Match : EGF_CA (HMM E-Value=3.9e-14)
Length = 1087
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 380 LKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
LKGH +T T + C +C C S NY KT +C
Sbjct: 145 LKGHVIETITATEKD-CRAIC--RRNSACNSINYIRKTSQC 182
>SB_35350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 320 CLGENEFVCRSANYNNKTGECVSLTW 243
C +++ C+S+ Y TGEC+ +W
Sbjct: 585 CPNSSQY-CKSSEYQCSTGECIHKSW 609
>SB_30074| Best HMM Match : PAN (HMM E-Value=3.3e-07)
Length = 221
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -1
Query: 580 QCHANDTCRAVNYE--TGLCVLFSSD 509
+C ND CR+ NY+ LC L +SD
Sbjct: 40 ECFMNDNCRSYNYDRKLQLCQLSNSD 65
>SB_12383| Best HMM Match : EGF_CA (HMM E-Value=2.5e-12)
Length = 228
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 380 LKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGEC 258
LKGH +T T + C +C C S NY KT +C
Sbjct: 38 LKGHVIETITATEKD-CRAIC--RRNSACNSINYIRKTSQC 75
>SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1288
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 320 CLGENEFVCRSANYNNKTGECVSLTW 243
C +++ C+S+ Y TGEC+ +W
Sbjct: 740 CPNSSQY-CKSSEYQCSTGECIHKSW 764
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,751,915
Number of Sequences: 59808
Number of extensions: 466367
Number of successful extensions: 1450
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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