Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0969
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.4  
AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    24   3.2  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   4.3  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   4.3  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.3  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.6  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   5.6  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   5.6  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   5.6  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   5.6  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   5.6  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = -3

Query: 338 QMCLDLCLGENEFVCRSANYNNKTGE-CVSLTWTVSPWREPTLFNQTKT 195
           Q C D C G NE  C S   N K G  CV+   T       T  N  KT
Sbjct: 524 QECKDFCYGPNEDNCGSC-MNVKDGRFCVAECPTTKHAMNGTCINCHKT 571


>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein S18
           protein.
          Length = 46

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 398 RVRGYHLKGHGKKTHTVG 345
           RVRG H K  G++  TVG
Sbjct: 24  RVRGQHTKTTGRRGRTVG 41


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 254 SLTWTVSPWREPTLFNQTKTPTIW 183
           ++T T   W +PT ++   T T W
Sbjct: 150 TITTTTPVWTDPTTWSAPTTTTTW 173


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 254 SLTWTVSPWREPTLFNQTKTPTIW 183
           ++T T   W +PT ++   T T W
Sbjct: 150 TITTTTPVWTDPTTWSAPTTTTTW 173


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 254 SLTWTVSPWREPTLFNQTKTPTIW 183
           ++T T   W +PT ++   T T W
Sbjct: 151 TITTTTPVWTDPTTWSAPTTTTTW 174



 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = -3

Query: 248 TWTVSPWREPTLFNQTKTPTIWRT-TALKSQQNCASLKKWVD 126
           T T + W +PT    T  PT   T + L       +   W+D
Sbjct: 183 TTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPTTTTTVWID 224


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 126  RILKTVDSVYQDVQTIEECRELCLNS-PFRCHSYDHGD 16
            R+L T    ++D+ T+    E CLNS P    S D  D
Sbjct: 1559 RVLGTGHLTFEDLSTLLAEIEACLNSRPITAISEDPND 1596


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 254 SLTWTVSPWREPTLFNQTKTPTIW 183
           ++T T   W +PT ++   T T W
Sbjct: 151 TITTTTPIWTDPTTWSAPTTTTTW 174



 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = -3

Query: 248 TWTVSPWREPTLFNQTKTPTIWRT-TALKSQQNCASLKKWVD 126
           T T + W +PT    T  PT   T + L       +   W+D
Sbjct: 183 TTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPTTTTTVWID 224


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 254 SLTWTVSPWREPTLFNQTKTPTIW 183
           ++T T   W +PT ++   T T W
Sbjct: 151 TITTTTPIWTDPTTWSAPTTTTTW 174



 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = -3

Query: 248 TWTVSPWREPTLFNQTKTPTIWRT-TALKSQQNCASLKKWVD 126
           T T + W +PT    T  PT   T + L       +   W+D
Sbjct: 183 TTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPTTTTTVWID 224


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 254 SLTWTVSPWREPTLFNQTKTPTIW 183
           ++T T   W +PT ++   T T W
Sbjct: 151 TITTTTPIWTDPTTWSAPTTTTTW 174


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 254 SLTWTVSPWREPTLFNQTKTPTIW 183
           ++T T   W +PT ++   T T W
Sbjct: 151 TITTTTPIWTDPTTWSAPTTTTTW 174



 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = -3

Query: 248 TWTVSPWREPTLFNQTKTPTIWRT-TALKSQQNCASLKKWVD 126
           T T + W +PT    T  PT   T + L       +   W+D
Sbjct: 183 TTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPTTTTTVWID 224


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 254 SLTWTVSPWREPTLFNQTKTPTIW 183
           ++T T   W +PT ++   T T W
Sbjct: 151 TITTTTPIWTDPTTWSAPTTTTTW 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,565
Number of Sequences: 2352
Number of extensions: 14698
Number of successful extensions: 42
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)