BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0966 (433 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 1e-32 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 1e-32 SB_56| Best HMM Match : Actin (HMM E-Value=0) 135 1e-32 SB_56628| Best HMM Match : Actin (HMM E-Value=0) 135 1e-32 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 1e-32 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 1e-30 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 4e-13 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 1e-09 SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 1e-09 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 2e-07 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 1e-05 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 46 2e-05 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 42 3e-04 SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23 SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.31 SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 31 0.53 SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.71 SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 0.71 SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 0.71 SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.93 SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 0.93 SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 0.93 SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 0.93 SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.93 SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 0.93 SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.93 SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 1.2 SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 2.2 SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 28 2.8 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8 SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8 SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 28 3.8 SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 27 5.0 SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0 SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 5.0 SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0 SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0 SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0 SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0 SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0 SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 27 5.0 SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 27 5.0 SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 27 5.0 SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 5.0 SB_37182| Best HMM Match : DUF225 (HMM E-Value=1) 27 6.6 SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 6.6 SB_57037| Best HMM Match : RVT_1 (HMM E-Value=3.4e-15) 27 8.7 SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 8.7 SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.7 SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 8.7 SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 27 8.7 SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.7 SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06) 27 8.7 SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 135 bits (327), Expect = 1e-32 Identities = 59/62 (95%), Positives = 61/62 (98%) Frame = +2 Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427 ++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121 Query: 428 QI 433 QI Sbjct: 122 QI 123 Score = 130 bits (314), Expect = 5e-31 Identities = 60/63 (95%), Positives = 62/63 (98%) Frame = +3 Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245 M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 246 SKR 254 SKR Sbjct: 61 SKR 63 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 135 bits (327), Expect = 1e-32 Identities = 59/62 (95%), Positives = 61/62 (98%) Frame = +2 Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427 ++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120 Query: 428 QI 433 QI Sbjct: 121 QI 122 Score = 127 bits (307), Expect = 3e-30 Identities = 58/61 (95%), Positives = 61/61 (100%) Frame = +3 Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 251 +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 252 R 254 R Sbjct: 62 R 62 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 135 bits (327), Expect = 1e-32 Identities = 59/62 (95%), Positives = 61/62 (98%) Frame = +2 Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427 ++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120 Query: 428 QI 433 QI Sbjct: 121 QI 122 Score = 128 bits (310), Expect = 1e-30 Identities = 59/61 (96%), Positives = 61/61 (100%) Frame = +3 Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 251 ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 252 R 254 R Sbjct: 62 R 62 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 135 bits (327), Expect = 1e-32 Identities = 59/62 (95%), Positives = 61/62 (98%) Frame = +2 Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427 ++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121 Query: 428 QI 433 QI Sbjct: 122 QI 123 Score = 134 bits (325), Expect = 2e-32 Identities = 61/63 (96%), Positives = 63/63 (100%) Frame = +3 Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245 MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 246 SKR 254 SKR Sbjct: 61 SKR 63 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 135 bits (327), Expect = 1e-32 Identities = 59/62 (95%), Positives = 61/62 (98%) Frame = +2 Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427 ++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121 Query: 428 QI 433 QI Sbjct: 122 QI 123 Score = 130 bits (314), Expect = 5e-31 Identities = 58/63 (92%), Positives = 62/63 (98%) Frame = +3 Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245 M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 246 SKR 254 SKR Sbjct: 61 SKR 63 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 128 bits (310), Expect = 1e-30 Identities = 58/61 (95%), Positives = 61/61 (100%) Frame = +3 Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 251 D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 252 R 254 R Sbjct: 62 R 62 Score = 57.2 bits (132), Expect = 5e-09 Identities = 24/30 (80%), Positives = 26/30 (86%) Frame = +2 Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTF 337 ++ ILTLKYPIEHGIVTNWDDMEKI TF Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 70.9 bits (166), Expect = 4e-13 Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Frame = +2 Query: 242 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 418 ++ + +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121 Query: 419 KMTQI 433 KM ++ Sbjct: 122 KMIEV 126 Score = 51.2 bits (117), Expect = 4e-07 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Frame = +3 Query: 84 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 254 + +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLR 65 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 59.7 bits (138), Expect = 1e-09 Identities = 27/39 (69%), Positives = 29/39 (74%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 191 E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 59.7 bits (138), Expect = 1e-09 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = +3 Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 191 +V+DNGSG CKAG + D++PR VFP+IVGRPRH+ Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130 Score = 56.4 bits (130), Expect = 9e-09 Identities = 25/39 (64%), Positives = 31/39 (79%) Frame = +2 Query: 317 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 433 K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+ Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQL 2167 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 52.0 bits (119), Expect = 2e-07 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Frame = +3 Query: 60 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 230 FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752 Query: 231 GDEAQSK 251 GD A +K Sbjct: 753 GDAAVAK 759 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 46.0 bits (104), Expect = 1e-05 Identities = 18/38 (47%), Positives = 23/38 (60%) Frame = +2 Query: 269 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 382 K+PI H IV +WD ME+ W + LR PE+H LL Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 45.6 bits (103), Expect = 2e-05 Identities = 18/53 (33%), Positives = 33/53 (62%) Frame = +2 Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 433 PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++ Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTEL 55 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 41.9 bits (94), Expect = 2e-04 Identities = 21/39 (53%), Positives = 27/39 (69%) Frame = -3 Query: 188 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 72 MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 41.5 bits (93), Expect = 3e-04 Identities = 16/23 (69%), Positives = 20/23 (86%) Frame = +2 Query: 365 EHPVLLTEAPLNPKANREKMTQI 433 +HPVLLTEAPLNP+ NREK ++ Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEV 148 >SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 220 Score = 31.9 bits (69), Expect = 0.23 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Frame = +2 Query: 191 GRDGRYGTEGLLCRR*-GTEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 361 GR G + GL G+ + L+ P + +VT+++ E++ H F + P Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164 Query: 362 EEHPVLLTEAPLNPKANRE 418 HPV++TE NP R+ Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183 >SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 120 Score = 31.5 bits (68), Expect = 0.31 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 163 GNTARGASSPAKPALHIPEPLSTT 92 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 31.5 bits (68), Expect = 0.31 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 163 GNTARGASSPAKPALHIPEPLSTT 92 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) Length = 186 Score = 30.7 bits (66), Expect = 0.53 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%) Frame = -2 Query: 369 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVRILFCSVPHLLHKSPSVPYRPS 196 CS + + C + ++V CS Y+ V + CS + H+ PS Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147 Query: 195 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 103 R D FP + R HH+L + + R+H Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178 >SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 30.3 bits (65), Expect = 0.71 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 163 GNTARGASSPAKPALHIPEPLSTT 92 GNT R PAKP+L++P P S T Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563 >SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) Length = 272 Score = 30.3 bits (65), Expect = 0.71 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C V+LSH + H M D +HG RS SCET L T Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259 >SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) Length = 580 Score = 30.3 bits (65), Expect = 0.71 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +2 Query: 254 SILTLKYPIEHGIVTNWDDMEKIWHHTFYNE 346 S L P + G + NWD ++IW +TF E Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315 Score = 27.9 bits (59), Expect = 3.8 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 78 EVAALVVDNGSGMCKAGFAGDDAPRAV 158 ++A LV+D G+ K GFA + APR++ Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258 >SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 591 Score = 29.9 bits (64), Expect = 0.93 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C V+LSH + H M D +HG RS SCET L T Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454 >SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) Length = 892 Score = 29.9 bits (64), Expect = 0.93 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Frame = -3 Query: 251 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 87 FA CL + V+LSH + H L A +HG R+ SCET L H A + + Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520 Query: 86 GNFFVAHLELVK 51 G V L+ K Sbjct: 521 GQVDVLLLDFQK 532 >SB_21074| Best HMM Match : NadA (HMM E-Value=2) Length = 358 Score = 29.9 bits (64), Expect = 0.93 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C V+LSH + H M D +HG RS SCET L T Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317 >SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) Length = 339 Score = 29.9 bits (64), Expect = 0.93 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C V+LSH + H M D +HG RS SCET L T Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295 >SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 181 Score = 29.9 bits (64), Expect = 0.93 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C V+LSH + H M D +HG RS SCET L T Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137 >SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 402 Score = 29.9 bits (64), Expect = 0.93 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C V+LSH + H M D +HG RS SCET L T Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137 >SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 458 Score = 29.9 bits (64), Expect = 0.93 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C V+LSH + H M D +HG RS SCET L T Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171 >SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) Length = 570 Score = 29.5 bits (63), Expect = 1.2 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C ++LSH + H M D +HG RS SCET L T Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219 >SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) Length = 635 Score = 28.7 bits (61), Expect = 2.2 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = +2 Query: 158 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKSILTLKYPIEHGIVTNW--DDMEKIWHH 331 V L + +GR+ G+ +CR+ + ++TL + I G+ + D EK+W+H Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496 Query: 332 TFYN 343 T N Sbjct: 497 TCPN 500 >SB_35006| Best HMM Match : PT (HMM E-Value=3.4) Length = 325 Score = 28.3 bits (60), Expect = 2.8 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = -1 Query: 283 FDGVFEGQDTLLLCASSPT*ESFCPIPTITP*WRGLPT 170 +DGV + + LLL +SSP S PI TP +GL T Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 28.3 bits (60), Expect = 2.8 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -1 Query: 163 GNTARGASSPAKPALHIPEPLSTT 92 GNT R AKPAL++P P S T Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63 >SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 635 Score = 28.3 bits (60), Expect = 2.8 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -1 Query: 163 GNTARGASSPAKPALHIPEPLSTT 92 GNT R PAKP L IP P + T Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91 >SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) Length = 284 Score = 27.9 bits (59), Expect = 3.8 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +2 Query: 245 EQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN 400 E I + + +E G W+D+ + HTF +L + A E +P L+E PLN Sbjct: 37 ESTFINSREVKLEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLN 87 >SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) Length = 419 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C ++LSH + H L A +HG R +SCET L T Sbjct: 245 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288 >SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 285 Score = 27.5 bits (58), Expect = 5.0 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -1 Query: 178 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 68 L IE + A++P P + +P+ + +AAT +SH Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258 >SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C ++LSH + H L A +HG R +SCET L T Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149 >SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2396 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C ++LSH + H L A +HG R +SCET L T Sbjct: 1644 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687 >SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 859 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C ++LSH + H L A +HG R +SCET L T Sbjct: 672 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715 >SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3142 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 LC + ++LSH + H L +HG R +SCET L T Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900 >SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 617 Score = 27.5 bits (58), Expect = 5.0 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -2 Query: 234 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 88 LL +S P +P+ RP GGA P++ ++ + N+ T+ PT Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142 >SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 221 Score = 27.5 bits (58), Expect = 5.0 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = -2 Query: 240 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 70 P L +P + RPS + S + LL RP TYR+ LP+ LL + Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187 >SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) Length = 329 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C ++LSH + H L A +HG R +SCET L T Sbjct: 227 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270 >SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) Length = 1492 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C ++LSH + H L A +HG R +SCET L T Sbjct: 1082 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125 >SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) Length = 452 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C ++LSH + H L A +HG R +SCET L T Sbjct: 25 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68 >SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 Query: 245 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 111 +C ++LSH + H L A +HG R +SCET L T Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149 >SB_37182| Best HMM Match : DUF225 (HMM E-Value=1) Length = 1282 Score = 27.1 bits (57), Expect = 6.6 Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 2/91 (2%) Frame = -2 Query: 369 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRI--LFCSVPHLLHKSPSVPYRPS 196 CS + + C +S Q++ CS V + + CS + H+ P Sbjct: 232 CSPSRADVDMFPIACSCRCVSHQVLMSMCSPSRAHVDVFPIACSCRCVSHRVLMSMCSPL 291 Query: 195 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 103 FP + R HH+L + T R+H Sbjct: 292 SAHVDVFPIACSCRCVSHHVLMSMSSTLRAH 322 >SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) Length = 766 Score = 27.1 bits (57), Expect = 6.6 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +3 Query: 84 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 188 + +++D GS KAGFA ++A + + S++G H Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516 >SB_57037| Best HMM Match : RVT_1 (HMM E-Value=3.4e-15) Length = 291 Score = 26.6 bits (56), Expect = 8.7 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -3 Query: 221 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLELVK 51 V+LSH + H L A +HG R+ SCET L H A + + G V L+ K Sbjct: 4 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQK 62 >SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) Length = 209 Score = 26.6 bits (56), Expect = 8.7 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -3 Query: 221 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLELVK 51 V+LSH + H L A +HG R+ SCET L H A + + G V L+ K Sbjct: 104 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQK 162 >SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 522 Score = 26.6 bits (56), Expect = 8.7 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -3 Query: 221 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLELVK 51 V+LSH + H L A +HG R+ SCET L H A + + G V L+ K Sbjct: 104 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQK 162 >SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) Length = 221 Score = 26.6 bits (56), Expect = 8.7 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -3 Query: 221 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLELVK 51 V+LSH + H L A +HG R+ SCET L H A + + G V L+ K Sbjct: 137 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQK 195 >SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) Length = 224 Score = 26.6 bits (56), Expect = 8.7 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -3 Query: 221 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLELVK 51 V+LSH + H L A +HG R+ SCET L H A + + G V L+ K Sbjct: 54 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQK 112 >SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1676 Score = 26.6 bits (56), Expect = 8.7 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -3 Query: 221 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLELVK 51 V+LSH + H L A +HG R+ SCET L H A + + G V L+ K Sbjct: 726 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQK 784 >SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 552 Score = 26.6 bits (56), Expect = 8.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -1 Query: 319 LLHVIPVSDDSVFDGVFEGQDTLLLCASSPT 227 LL++ +S + F D L LC SSPT Sbjct: 392 LLYLEEISVQKLISACFRQDDKLYLCVSSPT 422 >SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1077 Score = 26.6 bits (56), Expect = 8.7 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = +3 Query: 63 KMCDEEVAALVVDNG-SGMCKAGFAGD 140 ++CD++ + +N MCKAG+ GD Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513 >SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 1176 Score = 26.6 bits (56), Expect = 8.7 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -3 Query: 221 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNFFVAHLELVK 51 V+LSH + H L A +HG R+ SCET L H A + + G V L+ K Sbjct: 810 VVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQK 868 >SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06) Length = 425 Score = 26.6 bits (56), Expect = 8.7 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -3 Query: 128 TGLAHTGAIVYYQRGNFFVAHLELVKLVRC 39 +G +T A VY+QRGN + H + V + C Sbjct: 358 SGRGNTWA-VYFQRGNTWTVHFQRVNTMGC 386 >SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2323 Score = 26.6 bits (56), Expect = 8.7 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -1 Query: 244 CASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKP 125 C S P F +P P W LP+ E N G SS A P Sbjct: 2229 CESDPVDSLFSEVP---PEWSTLPSPEQNAFGGDSSWASP 2265 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,566,192 Number of Sequences: 59808 Number of extensions: 370951 Number of successful extensions: 1102 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 980 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1096 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 822495283 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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