Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0966
(433 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 136 8e-33
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 136 8e-33
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 136 8e-33
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 136 8e-33
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 136 8e-33
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 136 8e-33
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 136 8e-33
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 136 8e-33
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 135 1e-32
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 135 1e-32
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 135 1e-32
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 135 1e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 134 2e-32
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 134 2e-32
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 134 3e-32
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 87 4e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 77 7e-15
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 69 1e-12
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 53 8e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.038
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.038
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 32 0.20
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 0.82
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 0.82
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 1.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.3
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 4.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 4.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 4.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 4.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 4.4
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 5.8
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 136 bits (328), Expect = 8e-33
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QI 433
QI
Sbjct: 122 QI 123
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 136 bits (328), Expect = 8e-33
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QI 433
QI
Sbjct: 122 QI 123
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 136 bits (328), Expect = 8e-33
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QI 433
QI
Sbjct: 122 QI 123
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 136 bits (328), Expect = 8e-33
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QI 433
QI
Sbjct: 122 QI 123
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 136 bits (328), Expect = 8e-33
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QI 433
QI
Sbjct: 122 QI 123
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 136 bits (328), Expect = 8e-33
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QI 433
QI
Sbjct: 122 QI 123
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 136 bits (328), Expect = 8e-33
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 6e-08
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKI 322
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 136 bits (328), Expect = 8e-33
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 6e-08
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKI 322
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QI 433
QI
Sbjct: 122 QI 123
Score = 134 bits (325), Expect = 2e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 428 QI 433
QI
Sbjct: 122 QI 123
Score = 133 bits (321), Expect = 6e-32
Identities = 59/63 (93%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 18 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 77
Query: 428 QI 433
QI
Sbjct: 78 QI 79
Score = 43.2 bits (97), Expect = 8e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 198 MVGMGQKDSYVGDEAQSKR 254
MVGMGQKDSYVGDEAQSKR
Sbjct: 1 MVGMGQKDSYVGDEAQSKR 19
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 135 bits (327), Expect = 1e-32
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 48 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 107
Query: 428 QI 433
QI
Sbjct: 108 QI 109
Score = 97.5 bits (232), Expect = 4e-21
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +3
Query: 120 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 49
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 134 bits (325), Expect = 2e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 6e-08
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKI 322
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 134 bits (325), Expect = 2e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 48.0 bits (109), Expect = 3e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDM 313
++ ILTLKYPIEHGIVTNWDDM
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDM 83
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 134 bits (323), Expect = 3e-32
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMT 120
Query: 428 QI 433
QI
Sbjct: 121 QI 122
Score = 129 bits (312), Expect = 7e-31
Identities = 59/61 (96%), Positives = 61/61 (100%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 251
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 R 254
R
Sbjct: 62 R 62
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 87.4 bits (207), Expect = 4e-18
Identities = 35/62 (56%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = +2
Query: 251 KSILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 427
+ + +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+
Sbjct: 65 RGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 428 QI 433
+I
Sbjct: 125 EI 126
Score = 60.9 bits (141), Expect = 4e-10
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S R
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNR 65
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 76.6 bits (180), Expect = 7e-15
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +2
Query: 242 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRE 418
++ + +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NRE
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNRE 121
Query: 419 KMTQI 433
KM Q+
Sbjct: 122 KMFQV 126
Score = 48.4 bits (110), Expect = 2e-06
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 254
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLR 65
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 68.9 bits (161), Expect = 1e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +2
Query: 263 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 433
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +I
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEI 136
Score = 36.7 bits (81), Expect = 0.007
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 173
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 53.2 bits (122), Expect = 8e-08
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +2
Query: 278 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 433
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+I
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEI 145
Score = 33.5 bits (73), Expect = 0.067
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 173
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.038
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTF 337
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.038
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTF 337
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 31.9 bits (69), Expect = 0.20
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -2
Query: 327 CQIFSMSSQLVTIPC-SMGYLRVRILFCSVPHLLHKSPSVP-YRPSRPD 187
CQ+FS QLVT+ SMG ++++++ +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 0.82
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 252 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 97
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 0.82
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 252 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 97
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 1.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 253 LLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATS 77
L++ +SS S TITP +G+PT N S+P P + STT A ++
Sbjct: 465 LVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATST 524
Query: 76 SS 71
+S
Sbjct: 525 AS 526
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 120 KAGFAGDDAPRAVFPSIVGRPRHQG 194
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 170 RGKAPPSGRDGRYGTEG 220
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 349 ACRPRGTPSPAH*GSPQPQGQQRED 423
AC GT SPA GSP PQ D
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNND 1254
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 349 ACRPRGTPSPAH*GSPQPQGQQRED 423
AC GT SPA GSP PQ D
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNND 1267
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 349 ACRPRGTPSPAH*GSPQPQGQQRED 423
AC GT SPA GSP PQ D
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNND 1255
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 349 ACRPRGTPSPAH*GSPQPQGQQRED 423
AC GT SPA GSP PQ D
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNND 1267
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 373
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 373
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 299 NWDDMEKIWHHTFYNE--LRVAPEEHPV 376
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,092,789
Number of Sequences: 27780
Number of extensions: 255947
Number of successful extensions: 1046
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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