BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0965 (555 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 26 0.22 AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 2.1 AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 2.1 AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 2.1 DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 4.8 AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 4.8 >AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate receptor protein. Length = 1040 Score = 26.2 bits (55), Expect = 0.22 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = +3 Query: 423 VDCSQAIEHYKLNADPLKN---PYVPKQKPEITRNNPEEFN 536 +DCS E+Y+L KN P V + + + NN ++ N Sbjct: 963 IDCSTQSEYYELEVKDQKNGKPPSVVSRSTQTSANNDKDTN 1003 >AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform C protein. Length = 548 Score = 23.0 bits (47), Expect = 2.1 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 429 CSQAIEHYKLNADPLKNPYVPKQKPEITRNNPEEFNI 539 C Q ++L + + PYVP+ K + + EE N+ Sbjct: 266 CPQEEACFRLLMNDILRPYVPEFKGVLDVKDVEEGNV 302 >AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform B protein. Length = 463 Score = 23.0 bits (47), Expect = 2.1 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 429 CSQAIEHYKLNADPLKNPYVPKQKPEITRNNPEEFNI 539 C Q ++L + + PYVP+ K + + EE N+ Sbjct: 181 CPQEEACFRLLMNDILRPYVPEFKGVLDVKDVEEGNV 217 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 23.0 bits (47), Expect = 2.1 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 429 CSQAIEHYKLNADPLKNPYVPKQKPEITRNNPEEFNI 539 C Q ++L + + PYVP+ K + + EE N+ Sbjct: 500 CPQEEACFRLLMNDILRPYVPEFKGVLDVKDVEEGNV 536 >DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly protein 9 protein. Length = 423 Score = 21.8 bits (44), Expect = 4.8 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 10 ASNMCGEMGKAVLRALTGALLCGVVSDAA 96 AS++ A + TGAL G+VSD A Sbjct: 295 ASDILWTQASAKAISETGALFFGLVSDTA 323 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 21.8 bits (44), Expect = 4.8 Identities = 7/17 (41%), Positives = 9/17 (52%) Frame = +2 Query: 203 PLAWTTPSTTPFRRLDS 253 P+ WT P FR+ S Sbjct: 801 PVRWTAPEAIAFRKFTS 817 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 156,521 Number of Sequences: 438 Number of extensions: 3698 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15949830 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -