Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0964
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.5  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   8.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 74  TRWAVSSSTHLSNKKTS 124
           TR + SSSTH S+++TS
Sbjct: 384 TRKSTSSSTHTSSQQTS 400


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 595 SLLISRQAFRNFYKFHCNNTIK 530
           ++L +   F  FY F+C  TIK
Sbjct: 6   TVLTAAAVFLLFYLFYCYKTIK 27


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 595 SLLISRQAFRNFYKFHCNNTIK 530
           ++L +   F  FY F+C  TIK
Sbjct: 6   TVLTAAAVFLLFYLFYCYKTIK 27


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -2

Query: 122 KFFYCLDG 99
           KF+YC+DG
Sbjct: 124 KFYYCVDG 131


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory
          receptor candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 67 WLLEPMDIYNVNAPPTLRYK 8
          WL  P  + N   P +LR+K
Sbjct: 7  WLTPPHSLGNTVTPVSLRFK 26


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 441 KSHCYI*VWLSTFEAEIR 388
           K HCY+ V L+ F   ++
Sbjct: 37  KEHCYVLVRLARFRDSVK 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,672
Number of Sequences: 336
Number of extensions: 3226
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)