Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0963
         (601 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3X1 Cluster: Putative uncharacterized protein PFE068...    33   5.1  
UniRef50_Q7RRT3 Cluster: Putative uncharacterized protein PY0063...    33   5.1  
UniRef50_Q4YPM4 Cluster: Putative uncharacterized protein; n=4; ...    33   6.8  
UniRef50_A0EEN6 Cluster: Chromosome undetermined scaffold_92, wh...    33   6.8  
UniRef50_Q1EUP4 Cluster: MutS 2 protein; n=5; Clostridiaceae|Rep...    32   9.0  
UniRef50_Q8I2T2 Cluster: Ubiquitin-like protein, putative; n=2; ...    32   9.0  
UniRef50_Q4U8N7 Cluster: Hypothetical product; n=4; Theileria|Re...    32   9.0  

>UniRef50_Q8I3X1 Cluster: Putative uncharacterized protein PFE0680w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE0680w - Plasmodium falciparum
           (isolate 3D7)
          Length = 231

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
 Frame = +1

Query: 79  RYCYISRFLQ*IIHVKRFTGI*SCLIYLETEEKKPSHPYSDILQRQVSKL*FIKKLLTLR 258
           + C +   +Q I++      I     + +TEE    + +SDI +R+   + F K+++ L 
Sbjct: 28  KLCELFNLIQLILYTHVLLNICYGFYFEQTEELLIKNAHSDICKRE-HYISFNKEIIKLC 86

Query: 259 MIEQPRTIKIAVN*INN--KEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLMNGIFFIK 432
           +  QP  +    N I N  KE+K   K K+       I+ +  +  + K  L+    F K
Sbjct: 87  LFSQPSGVHSKYNLIVNTLKEEKWEEKYKILKENTFKILKY-FYTFVNKNELVIIFCFNK 145

Query: 433 MCCYTTLICTKTSN 474
           +       C ++ N
Sbjct: 146 LINKAPYECHRSIN 159


>UniRef50_Q7RRT3 Cluster: Putative uncharacterized protein PY00634;
           n=12; Plasmodium (Vinckeia)|Rep: Putative
           uncharacterized protein PY00634 - Plasmodium yoelii
           yoelii
          Length = 5309

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +1

Query: 310 KEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLMNGIFFIKMCCYTTLIC 459
           +EK+  SK+K+      S  S  ++N IKKYN+   I+F  +C  + L C
Sbjct: 211 EEKETKSKDKVK----QSHPSLHIYNFIKKYNIDIEIYFCMICMNSILFC 256


>UniRef50_Q4YPM4 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 1119

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
 Frame = +1

Query: 70  NDNRYC---YISRFLQ*IIHVKRFTG---I*SCLIYLETEEKKPSHPYSDILQRQVSKL* 231
           NDN+ C   YI +  Q I++   FTG   I + LI+++  +K   H     L  +  +L 
Sbjct: 397 NDNKICFSNYIGQKEQRILN-DNFTGNDAISNILIFVKENKKNIFHNNKIKLIIKEDEL- 454

Query: 232 FIKKLLTLRMIEQPRTIKIAVN*INNKEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLM 411
            +K LL    ++   T +++ N +       +S  KL   KI +I +F+L N  K Y + 
Sbjct: 455 LLKFLLLFYQLDN--TYELSDNLMKIILVNYYSL-KLDIDKIENICNFILTNTQKNY-IF 510

Query: 412 NGIFFIKMCCYTTLICTKTSNL 477
           N +F I +  Y   +  K+  +
Sbjct: 511 NILFIINLISYYIFLIKKSEGI 532


>UniRef50_A0EEN6 Cluster: Chromosome undetermined scaffold_92, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_92,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1049

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +1

Query: 256 RMIEQPRTIKIAVN*INNKEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLMNGIFFIK 432
           + ++  R+    VN +NN  + +H  N L  RKI  I  F      K   ++N + FIK
Sbjct: 712 QQLDLERSFNKLVNQLNNNTQIMHKINGLEQRKITKIHPFTYTERFKIIQILNDLTFIK 770


>UniRef50_Q1EUP4 Cluster: MutS 2 protein; n=5; Clostridiaceae|Rep:
           MutS 2 protein - Clostridium oremlandii OhILAs
          Length = 790

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 19/72 (26%), Positives = 37/72 (51%)
 Frame = +1

Query: 157 YLETEEKKPSHPYSDILQRQVSKL*FIKKLLTLRMIEQPRTIKIAVN*INNKEKKIHSKN 336
           +L+ ++K+ ++P    L   +S L  I+  + L +I +      A   + N  ++I SKN
Sbjct: 105 FLKDDKKESTYPIIQELGNNISSLKHIEDKIELCIISETELSDNASPELRNIRRQISSKN 164

Query: 337 KLSFRKINSIVS 372
                K+NSI++
Sbjct: 165 DAIRNKLNSIIT 176


>UniRef50_Q8I2T2 Cluster: Ubiquitin-like protein, putative; n=2;
           Plasmodium|Rep: Ubiquitin-like protein, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 1542

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +1

Query: 259 MIEQPRTIKIAVN*INNKEKKIHSKNKLSFRKINSIVS 372
           M E+  TIKI +  INN+E +++ K+ ++  ++ SI++
Sbjct: 1   MAEERNTIKIKIKSINNEEYELNVKDDMNIEELKSIIA 38


>UniRef50_Q4U8N7 Cluster: Hypothetical product; n=4; Theileria|Rep:
           Hypothetical product - Theileria annulata
          Length = 1022

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = -3

Query: 266 SIILSVNNFFINYNLET----CLCKISEYGCEGFFSS 168
           SI+LS  +F  N N ET    C+C ++ YGC+  F++
Sbjct: 487 SIVLSFKSFMKNKNNETKSKYCICDMALYGCQKLFTT 523


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,489,835
Number of Sequences: 1657284
Number of extensions: 7778314
Number of successful extensions: 16195
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16185
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)