Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0963
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ...    29   3.3  
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ...    29   3.3  
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ...    29   3.3  

>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 238 KKLLTLRMIEQPRTIKIAVN*INNKEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLMNG 417
           + L + R +   RT+++    + +      + N +  +K N I SFV   + +++     
Sbjct: 71  RSLFSRRRVLHSRTVRVGYGPVGHDANVTFTPNTVCNQKYN-IFSFVPIVLFQQFKFFLN 129

Query: 418 IFFIKMCC 441
           ++F+ M C
Sbjct: 130 LYFLLMAC 137


>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 238 KKLLTLRMIEQPRTIKIAVN*INNKEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLMNG 417
           + L + R +   RT+++    + +      + N +  +K N I SFV   + +++     
Sbjct: 35  RSLFSRRRVLHSRTVRVGYGPVGHDANVTFTPNTVCNQKYN-IFSFVPIVLFQQFKFFLN 93

Query: 418 IFFIKMCC 441
           ++F+ M C
Sbjct: 94  LYFLLMAC 101


>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 238 KKLLTLRMIEQPRTIKIAVN*INNKEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLMNG 417
           + L + R +   RT+++    + +      + N +  +K N I SFV   + +++     
Sbjct: 74  RSLFSRRRVLHSRTVRVGYGPVGHDANVTFTPNTVCNQKYN-IFSFVPIVLFQQFKFFLN 132

Query: 418 IFFIKMCC 441
           ++F+ M C
Sbjct: 133 LYFLLMAC 140


>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 238 KKLLTLRMIEQPRTIKIAVN*INNKEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLMNG 417
           + L + R +   RT+++    + +      + N +  +K N I SFV   + +++     
Sbjct: 71  RSLFSRRRVLHSRTVRVGYGPVGHDANVTFTPNTVCNQKYN-IFSFVPIVLFQQFKFFLN 129

Query: 418 IFFIKMCC 441
           ++F+ M C
Sbjct: 130 LYFLLMAC 137


>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 238 KKLLTLRMIEQPRTIKIAVN*INNKEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLMNG 417
           + L + R +   RT+++    + +      + N +  +K N I SFV   + +++     
Sbjct: 35  RSLFSRRRVLHSRTVRVGYGPVGHDANVTFTPNTVCNQKYN-IFSFVPIVLFQQFKFFLN 93

Query: 418 IFFIKMCC 441
           ++F+ M C
Sbjct: 94  LYFLLMAC 101


>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 238 KKLLTLRMIEQPRTIKIAVN*INNKEKKIHSKNKLSFRKINSIVSFVLFNIIKKYNLMNG 417
           + L + R +   RT+++    + +      + N +  +K N I SFV   + +++     
Sbjct: 74  RSLFSRRRVLHSRTVRVGYGPVGHDANVTFTPNTVCNQKYN-IFSFVPIVLFQQFKFFLN 132

Query: 418 IFFIKMCC 441
           ++F+ M C
Sbjct: 133 LYFLLMAC 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,450,568
Number of Sequences: 27780
Number of extensions: 207064
Number of successful extensions: 449
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)