Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0962
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   3.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.6  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/41 (21%), Positives = 18/41 (43%)
 Frame = +2

Query: 407 QRGQTVKKDISTIHSCRPYLCFWVKCYVYLCSNWVLQNTEH 529
           ++ +T+      IH        W + + Y   +W+ + TEH
Sbjct: 179 KKNKTLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEH 219


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/41 (21%), Positives = 18/41 (43%)
 Frame = +2

Query: 407 QRGQTVKKDISTIHSCRPYLCFWVKCYVYLCSNWVLQNTEH 529
           ++ +T+      IH        W + + Y   +W+ + TEH
Sbjct: 493 KKNKTLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEH 533


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/41 (21%), Positives = 18/41 (43%)
 Frame = +2

Query: 407 QRGQTVKKDISTIHSCRPYLCFWVKCYVYLCSNWVLQNTEH 529
           ++ +T+      IH        W + + Y   +W+ + TEH
Sbjct: 726 KKNKTLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEH 766


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/41 (21%), Positives = 18/41 (43%)
 Frame = +2

Query: 407 QRGQTVKKDISTIHSCRPYLCFWVKCYVYLCSNWVLQNTEH 529
           ++ +T+      IH        W + + Y   +W+ + TEH
Sbjct: 726 KKNKTLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEH 766


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +2

Query: 473 WVKCYVYLCSNWVLQNTEH 529
           W + + Y   +W+ + TEH
Sbjct: 775 WYQMFEYAIGHWLQKATEH 793


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +2

Query: 473 WVKCYVYLCSNWVLQNTEH 529
           W + + Y   +W+ + TEH
Sbjct: 775 WYQMFEYAIGHWLQKATEH 793


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +2

Query: 473 WVKCYVYLCSNWVLQNTEH 529
           W + + Y   +W+ + TEH
Sbjct: 775 WYQMFEYAIGHWLQKATEH 793


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +2

Query: 473 WVKCYVYLCSNWVLQNTEH 529
           W + + Y   +W+ + TEH
Sbjct: 775 WYQMFEYAIGHWLQKATEH 793


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 149 ILTIIFDCVLQTL 187
           I+ +IFDC L+T+
Sbjct: 245 IILVIFDCCLETV 257


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +2

Query: 494 LCSNWVLQNTEHWGTFINSWNTKLQSLNSDARSYVGFGLEH 616
           L S++   N +      ++ N    S+N D     G+G EH
Sbjct: 341 LMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCGNGYGCEH 381


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,708
Number of Sequences: 336
Number of extensions: 3424
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)