Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0962
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058745-1|AAL13974.1|  381|Drosophila melanogaster LP09696p pro...    61   1e-09
AE014297-1417|AAF54727.1|  381|Drosophila melanogaster CG10007-P...    61   1e-09
AY071412-1|AAL49034.1|  419|Drosophila melanogaster RE49527p pro...    29   4.1  
AE014297-4837|AAN14299.1|  492|Drosophila melanogaster CG2003-PB...    29   4.1  
AE014297-4836|AAF57210.1|  492|Drosophila melanogaster CG2003-PA...    29   4.1  
AY069077-1|AAL39222.1|  639|Drosophila melanogaster GH09339p pro...    29   7.1  
AE014297-1954|AAF55141.2|  639|Drosophila melanogaster CG6654-PA...    29   7.1  
AY118991-1|AAM50851.1|  504|Drosophila melanogaster LP02712p pro...    28   9.4  
AE014298-360|AAF45750.3|  504|Drosophila melanogaster CG18031-PA...    28   9.4  

>AY058745-1|AAL13974.1|  381|Drosophila melanogaster LP09696p
           protein.
          Length = 381

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = +1

Query: 322 NYQKFLALMMLVTGSINSLSTKWADILKSKGSDGEERYFNHPFLQTLSMFLGEMLCLLVF 501
           +++ FL+L+ +++G+ N L  KWA+  +  GSDG+   F HP + TL MFLGE LC  VF
Sbjct: 2   DHRVFLSLIFVLSGTFNVLVVKWANQQQVIGSDGKLHGFQHPVVFTLLMFLGEFLCFAVF 61

Query: 502 KL 507
           K+
Sbjct: 62  KV 63


>AE014297-1417|AAF54727.1|  381|Drosophila melanogaster CG10007-PA
           protein.
          Length = 381

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = +1

Query: 322 NYQKFLALMMLVTGSINSLSTKWADILKSKGSDGEERYFNHPFLQTLSMFLGEMLCLLVF 501
           +++ FL+L+ +++G+ N L  KWA+  +  GSDG+   F HP + TL MFLGE LC  VF
Sbjct: 2   DHRVFLSLIFVLSGTFNVLVVKWANQQQVIGSDGKLHGFQHPVVFTLLMFLGEFLCFAVF 61

Query: 502 KL 507
           K+
Sbjct: 62  KV 63


>AY071412-1|AAL49034.1|  419|Drosophila melanogaster RE49527p
           protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 437 STIHSCRPYLCFWVKCYVYL 496
           + + S  P+L  WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308


>AE014297-4837|AAN14299.1|  492|Drosophila melanogaster CG2003-PB,
           isoform B protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 437 STIHSCRPYLCFWVKCYVYL 496
           + + S  P+L  WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308


>AE014297-4836|AAF57210.1|  492|Drosophila melanogaster CG2003-PA,
           isoform A protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 437 STIHSCRPYLCFWVKCYVYL 496
           + + S  P+L  WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308


>AY069077-1|AAL39222.1|  639|Drosophila melanogaster GH09339p
           protein.
          Length = 639

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = -3

Query: 399 YISPFC----TQRVD*ASHQH-HQGEELLVVCP 316
           Y+ PFC    TQR D   HQ  HQGE  + +CP
Sbjct: 552 YVCPFCSKTFTQRGDCQMHQRTHQGER-IYICP 583


>AE014297-1954|AAF55141.2|  639|Drosophila melanogaster CG6654-PA
           protein.
          Length = 639

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = -3

Query: 399 YISPFC----TQRVD*ASHQH-HQGEELLVVCP 316
           Y+ PFC    TQR D   HQ  HQGE  + +CP
Sbjct: 552 YVCPFCSKTFTQRGDCQMHQRTHQGER-IYICP 583


>AY118991-1|AAM50851.1|  504|Drosophila melanogaster LP02712p
           protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -2

Query: 475 PKT*IRSARMDG*NIFLHRLTPLILIYQPILY 380
           PKT  RS R+    +FL+RL  L L+Y+ IL+
Sbjct: 463 PKTLERSKRILRIKVFLYRLLRLFLLYKLILW 494


>AE014298-360|AAF45750.3|  504|Drosophila melanogaster CG18031-PA
           protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -2

Query: 475 PKT*IRSARMDG*NIFLHRLTPLILIYQPILY 380
           PKT  RS R+    +FL+RL  L L+Y+ IL+
Sbjct: 463 PKTLERSKRILRIKVFLYRLLRLFLLYKLILW 494


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,124,185
Number of Sequences: 53049
Number of extensions: 554030
Number of successful extensions: 1115
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)