BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0961 (572 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0386 + 33555682-33556344,33557138-33557299 149 1e-36 07_01_0756 + 5819367-5820038,5820847-5821005 148 3e-36 07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871 62 4e-10 06_03_0637 - 22995831-22996667,22997200-22997694 31 0.86 07_03_0681 + 20659789-20659839,20660030-20660170,20661294-206613... 30 1.5 11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 29 2.0 07_01_0163 + 1149466-1150593,1150733-1150937,1151453-1151485,115... 28 4.6 11_01_0395 + 2999855-2999920,3000605-3002191 28 6.1 06_03_0956 + 26296744-26297382,26297595-26297669,26298147-262983... 28 6.1 09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 27 8.0 04_03_0137 + 11703765-11703980,11704719-11705471 27 8.0 02_02_0342 + 9159661-9160299 27 8.0 01_05_0134 - 18456233-18457572,18457636-18457863,18458134-18458293 27 8.0 >03_06_0386 + 33555682-33556344,33557138-33557299 Length = 274 Score = 149 bits (362), Expect = 1e-36 Identities = 72/105 (68%), Positives = 84/105 (80%) Frame = +1 Query: 253 HNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVT 432 +NGH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPCKVTGKCGSVT Sbjct: 116 NNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNKIGQPHTVPCKVTGKCGSVT 175 Query: 433 VRLIPALVVLELCLRQVPKKLLQMAVYRTCYTFNSLVQLAPLGNF 567 VR++PA + +VPKK+LQ A +T +S LGNF Sbjct: 176 VRMVPAPRGSGIVAARVPKKVLQFAGIEDVFT-SSRGSTKTLGNF 219 Score = 118 bits (283), Expect = 4e-27 Identities = 54/84 (64%), Positives = 69/84 (82%) Frame = +2 Query: 2 GRGRGKEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLK 181 GR ++++++WVPVTKLGRLV+EG+ K+E IYL SLP+KE +I++ L P L DEV+K Sbjct: 33 GRRGPRQEEEKWVPVTKLGRLVKEGRFSKIEEIYLHSLPVKEHQIVE-TLVPGLKDEVMK 91 Query: 182 IMPVQKQTRAGQRTRFKAFVAIGD 253 I PVQKQTRAGQRTRFKAFV +GD Sbjct: 92 ITPVQKQTRAGQRTRFKAFVVVGD 115 >07_01_0756 + 5819367-5820038,5820847-5821005 Length = 276 Score = 148 bits (359), Expect = 3e-36 Identities = 72/104 (69%), Positives = 82/104 (78%) Frame = +1 Query: 256 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 435 +GH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV Sbjct: 120 DGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 179 Query: 436 RLIPALVVLELCLRQVPKKLLQMAVYRTCYTFNSLVQLAPLGNF 567 R++PA + VPKK+LQ A +T +S LGNF Sbjct: 180 RMVPAPRGSGIVAAHVPKKVLQFAGIEDVFT-SSRGSTKTLGNF 222 Score = 117 bits (282), Expect = 6e-27 Identities = 55/84 (65%), Positives = 69/84 (82%) Frame = +2 Query: 2 GRGRGKEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLK 181 GR ++++++WVPVTKLGRLV+E KI K+E IYL SLP+KE +I++ L P L DEV+K Sbjct: 36 GRRGPRQEEEKWVPVTKLGRLVKENKIHKIEEIYLHSLPVKEHQIVE-QLVPGLKDEVMK 94 Query: 182 IMPVQKQTRAGQRTRFKAFVAIGD 253 I PVQKQTRAGQRTRFKAFV +GD Sbjct: 95 ITPVQKQTRAGQRTRFKAFVVVGD 118 >07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871 Length = 233 Score = 61.7 bits (143), Expect = 4e-10 Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Frame = +1 Query: 256 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG-KPHTVPCKVTGKCGSVT 432 + HI LGVKC+K AT + GAIILA + G I KPHTV CKV K GSVT Sbjct: 9 DSHIELGVKCAK--ATTMSGAIILA---MFRCAEGATRETISRKPHTVSCKVADKYGSVT 63 Query: 433 VRLIPALVVLELCLRQVPKKLLQMAVYRTCYTFNSLVQLAPLGNF 567 VR++ + + +VPKK+L+ A +T +S L NF Sbjct: 64 VRMMLPPMGSSVVATRVPKKVLKFAGIEDVFT-SSRGSTKTLSNF 107 >06_03_0637 - 22995831-22996667,22997200-22997694 Length = 443 Score = 30.7 bits (66), Expect = 0.86 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +1 Query: 298 ATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPALV-VLELCL 474 A A++ + VL + GYWGN I P KV+ G V + LV V+ Sbjct: 288 AAAVKLCFFASARQVLGLETGYWGNAI-----FPVKVSAAAGEVAASSVIELVGVVREAK 342 Query: 475 RQVPKKLLQMAVYRT 519 R++ + L+ A RT Sbjct: 343 RRMAGECLRWAEGRT 357 >07_03_0681 + 20659789-20659839,20660030-20660170,20661294-20661399, 20661625-20661806,20661888-20662113,20662198-20662624, 20662844-20663189,20663271-20663849 Length = 685 Score = 29.9 bits (64), Expect = 1.5 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = -3 Query: 408 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMT 259 DL D ++ + + + W NR +++ + G G ALH TNM+ Sbjct: 354 DLDEDNRGMAQIRDDLAGAMWNNRGMAEAGGGNGGHGGHHGALHWTTNMS 403 >11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367, 4004474-4004556,4004661-4004775,4005309-4005400, 4005558-4005612,4005689-4005834,4005888-4006001, 4006149-4006342,4006985-4007112,4008526-4008583, 4009800-4009876,4010214-4010263,4010336-4010515, 4010633-4010731,4010816-4011133,4011221-4011281, 4011693-4012781,4012951-4013005,4013133-4013291, 4013923-4014442 Length = 1406 Score = 29.5 bits (63), Expect = 2.0 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +2 Query: 14 GKEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLG 154 G + KE +P G V G+ +++ + SLPIK++ + FF G Sbjct: 803 GADGSKEVIPQEYCGLEVLSGEAAWSKNVLVPSLPIKKYPVHSFFSG 849 >07_01_0163 + 1149466-1150593,1150733-1150937,1151453-1151485, 1152244-1153646 Length = 922 Score = 28.3 bits (60), Expect = 4.6 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = +3 Query: 390 HRPLQGHRQVWFCNSPXDSCPRG--TGIVSAPSS*KASSDGCVQDLLHLQLVGSTGTLG 560 ++ +QG++Q WF P +S RG + A + A D D++ LQL ST +G Sbjct: 174 YKSIQGNKQHWFWVRPNNSAERGIEAKLFFAFNDGSAPEDNFYIDII-LQLSESTNIVG 231 >11_01_0395 + 2999855-2999920,3000605-3002191 Length = 550 Score = 27.9 bits (59), Expect = 6.1 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = +2 Query: 104 LFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRT 223 +F +++ ++IDF L L D + I+P+ R G++T Sbjct: 237 MFGRRVEKEKVIDFLLCSDLPDTYVSILPIIGPHRIGKKT 276 >06_03_0956 + 26296744-26297382,26297595-26297669,26298147-26298341, 26298426-26298559,26298713-26298779,26298985-26299043, 26299204-26299321,26299613-26299726,26299855-26299986, 26300076-26300492,26300904-26300954,26301303-26301373, 26302067-26302151,26302258-26302410,26302522-26302596, 26302755-26302844,26303953-26304000,26304081-26304195, 26305356-26305459,26305582-26305692 Length = 950 Score = 27.9 bits (59), Expect = 6.1 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -3 Query: 543 NQRVEGVASPVHSHLKKLFRNLAQTQFQYHEGR 445 N G A P+H+HL L +L + +Y EGR Sbjct: 527 NLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGR 559 >09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578, 21497679-21497889,21497977-21498170,21498263-21498364, 21498525-21499879,21501193-21501494,21501600-21501750, 21501838-21502102,21502155-21502362,21502467-21502660, 21502749-21502850,21503481-21503680,21504010-21504846, 21505806-21506107,21506209-21506359,21506447-21506684, 21506764-21506971,21507078-21507271,21507322-21507462, 21513484-21514811,21515923-21516227,21516331-21516481, 21516570-21516807,21516881-21517088,21517197-21517366, 21517451-21517549,21517708-21519029,21521601-21521683 Length = 3314 Score = 27.5 bits (58), Expect = 8.0 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = -3 Query: 399 RDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMT 259 R VW++D TPVT+S+ LS NS++ D + TN+T Sbjct: 105 RTVVWVADRGTPVTNSSSSAPTLSLTNSSNLVLSDADGGVRWTTNIT 151 >04_03_0137 + 11703765-11703980,11704719-11705471 Length = 322 Score = 27.5 bits (58), Expect = 8.0 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Frame = +1 Query: 172 GSKDHACTETNTCR-TAHTFQGICCHWRHN----GHIGLGVKCSKEVATAIRGAIILAKL 336 G+ D C T TAH Q +H GH+GLG+ + RGA + KL Sbjct: 43 GAADGVCFPCGTSTATAHLLQPKHSQPQHEVLREGHVGLGIWPCSATGHSSRGAPVKVKL 102 Query: 337 S 339 S Sbjct: 103 S 103 >02_02_0342 + 9159661-9160299 Length = 212 Score = 27.5 bits (58), Expect = 8.0 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = +2 Query: 449 PSWYWNCVCAKFLKSF-FRWLCTG 517 PSW + +C K+LKSF +C G Sbjct: 101 PSWLCSYICVKYLKSFHLEGVCWG 124 >01_05_0134 - 18456233-18457572,18457636-18457863,18458134-18458293 Length = 575 Score = 27.5 bits (58), Expect = 8.0 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -3 Query: 555 GCQLNQRVEGVASPVHSHLKK 493 G + NQR EG+ S +HSHL + Sbjct: 293 GMRSNQRSEGLNSRIHSHLDR 313 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,122,090 Number of Sequences: 37544 Number of extensions: 414107 Number of successful extensions: 1112 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1067 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1108 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1328870592 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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