BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0961 (572 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.30 DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 25 0.53 X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 0.93 EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 0.93 AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 0.93 AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 24 0.93 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 3.8 AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 3.8 AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 22 3.8 AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 22 3.8 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.0 DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 6.6 DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 6.6 DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 6.6 DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 6.6 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 6.6 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 6.6 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 6.6 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 6.6 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 6.6 DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 21 8.7 AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 21 8.7 AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 21 8.7 AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 8.7 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.7 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.7 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 25.8 bits (54), Expect = 0.30 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = +2 Query: 173 VLKIMPVQKQTRAGQRTRFKAFVAIGDTTVILVWV*SAARKSPLP 307 +++ Q+ G RTR VA GD + + W+ PLP Sbjct: 612 IIEPFTFQEGLSEGMRTRTVCGVAAGDPPLTISWLKDGQSPFPLP 656 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 25.0 bits (52), Expect = 0.53 Identities = 8/21 (38%), Positives = 17/21 (80%) Frame = -3 Query: 555 GCQLNQRVEGVASPVHSHLKK 493 G L ++++G+++PV +HL+K Sbjct: 174 GKGLGKQLQGISTPVEAHLRK 194 >X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha protein. Length = 461 Score = 24.2 bits (50), Expect = 0.93 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 Query: 76 KNRQTREHLLVFFT 117 KN QTREH L+ FT Sbjct: 129 KNGQTREHALLAFT 142 >EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-alpha protein. Length = 172 Score = 24.2 bits (50), Expect = 0.93 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 Query: 76 KNRQTREHLLVFFT 117 KN QTREH L+ FT Sbjct: 56 KNGQTREHALLAFT 69 >AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-alpha protein. Length = 274 Score = 24.2 bits (50), Expect = 0.93 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 Query: 76 KNRQTREHLLVFFT 117 KN QTREH L+ FT Sbjct: 72 KNGQTREHALLAFT 85 >AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha F2 protein. Length = 461 Score = 24.2 bits (50), Expect = 0.93 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 Query: 76 KNRQTREHLLVFFT 117 KN QTREH L+ FT Sbjct: 129 KNGQTREHALLAFT 142 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 22.2 bits (45), Expect = 3.8 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +2 Query: 257 TVILVWV*SAARKSPL 304 T++LVW SAA SP+ Sbjct: 306 TILLVWAISAAIGSPI 321 >AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex determiner protein. Length = 410 Score = 22.2 bits (45), Expect = 3.8 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +1 Query: 28 ERVGSCHQTRPSCSRRKNRQTRE 96 + S + SCSR +NR+ RE Sbjct: 225 QHTSSRYSRERSCSRDRNREYRE 247 >AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. Length = 122 Score = 22.2 bits (45), Expect = 3.8 Identities = 8/33 (24%), Positives = 14/33 (42%) Frame = +2 Query: 467 CVCAKFLKSFFRWLCTGLATPSTRWFNWHPWEI 565 C+ F + WL G+ ++F H W + Sbjct: 44 CMATGFPRPEITWLKDGIELYHHKFFQVHEWPV 76 >AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. Length = 388 Score = 22.2 bits (45), Expect = 3.8 Identities = 8/30 (26%), Positives = 16/30 (53%) Frame = -2 Query: 109 KQVNALEFVDFSFANKTAEFGDRNPLFLVF 20 + +++ + V++ T GD P+FL F Sbjct: 355 QDISSPDAVEYGIIGPTTCMGDHKPVFLEF 384 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 21.8 bits (44), Expect = 5.0 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +1 Query: 40 SCHQTRP-SCSRRKNRQTRE 96 S H +R SCSR +NR+ +E Sbjct: 228 SSHYSRERSCSRDRNREYKE 247 >DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex determiner protein. Length = 176 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 61 SCSRRKNRQTRE 96 SCSR +NR+ RE Sbjct: 3 SCSRDRNREYRE 14 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 6.6 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +1 Query: 40 SCHQTRP-SCSRRKNRQTRE 96 S H +R SCSR +NR+ R+ Sbjct: 228 SSHYSRERSCSRDRNREYRK 247 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 6.6 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +1 Query: 40 SCHQTRP-SCSRRKNRQTRE 96 S H +R SCSR +NR+ R+ Sbjct: 228 SSHYSRERSCSRDRNREYRK 247 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 6.6 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +1 Query: 40 SCHQTRP-SCSRRKNRQTRE 96 S H +R SCSR +NR+ R+ Sbjct: 228 SSHYSRERSCSRDRNREYRK 247 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 6.6 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +1 Query: 40 SCHQTRP-SCSRRKNRQTRE 96 S H +R SCSR +NR+ R+ Sbjct: 228 SSHYSRERSCSRDRNREYRK 247 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.4 bits (43), Expect = 6.6 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +1 Query: 40 SCHQTRP-SCSRRKNRQTRE 96 S H +R SCSR +NR+ R+ Sbjct: 217 SSHYSRERSCSRDRNREYRK 236 >DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 precursor protein. Length = 223 Score = 21.0 bits (42), Expect = 8.7 Identities = 9/34 (26%), Positives = 15/34 (44%) Frame = +1 Query: 1 WSWARQGRPERVGSCHQTRPSCSRRKNRQTREHL 102 W+W RP + +QT S ++ RE + Sbjct: 70 WNWNTLLRPNFLDGWYQTLQSAISAHMKKVREQM 103 >AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich protein precursor protein. Length = 223 Score = 21.0 bits (42), Expect = 8.7 Identities = 9/34 (26%), Positives = 15/34 (44%) Frame = +1 Query: 1 WSWARQGRPERVGSCHQTRPSCSRRKNRQTREHL 102 W+W RP + +QT S ++ RE + Sbjct: 70 WNWNTLLRPNFLDGWYQTLQSAISAHMKKVREQM 103 >AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. Length = 223 Score = 21.0 bits (42), Expect = 8.7 Identities = 9/34 (26%), Positives = 15/34 (44%) Frame = +1 Query: 1 WSWARQGRPERVGSCHQTRPSCSRRKNRQTREHL 102 W+W RP + +QT S ++ RE + Sbjct: 70 WNWNTLLRPNFLDGWYQTLQSAISAHMKKVREQM 103 >AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = +1 Query: 28 ERVGSCHQTRPSCSRRKNRQTRE 96 + S + SCSR +NR+ +E Sbjct: 214 QHTSSRYSRERSCSRDRNREYKE 236 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = +1 Query: 28 ERVGSCHQTRPSCSRRKNRQTRE 96 + S + SCSR +NR+ +E Sbjct: 225 QHTSSRYSRERSCSRDRNREYKE 247 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = +1 Query: 28 ERVGSCHQTRPSCSRRKNRQTRE 96 + S + SCSR +NR+ +E Sbjct: 225 QHTSSRYSRERSCSRDRNREYKE 247 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 179,970 Number of Sequences: 438 Number of extensions: 4244 Number of successful extensions: 52 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 52 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 16504155 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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