BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0911 (717 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 7e-49 SB_56| Best HMM Match : Actin (HMM E-Value=0) 190 7e-49 SB_56628| Best HMM Match : Actin (HMM E-Value=0) 190 7e-49 SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 1e-48 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 1e-28 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21 SB_54| Best HMM Match : Actin (HMM E-Value=0) 94 1e-19 SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 81 9e-16 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 77 2e-14 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 65 6e-11 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 53 3e-07 SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 47 1e-05 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.076 SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 32 0.53 SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71 SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.71 SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.93 SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6 SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6 SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.2 SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3) 29 2.8 SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 3.8 SB_23912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8 SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8 SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 3.8 SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8 SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 3.8 SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 29 5.0 SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 5.0 SB_44542| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6 SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6 SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7 SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7 SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 8.7 SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7 SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 190 bits (464), Expect = 7e-49 Identities = 94/122 (77%), Positives = 95/122 (77%) Frame = +1 Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119 Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLD 615 TQIMFETFN+PAMYVAIQAVLSLY P PHAILRLD Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179 Query: 616 LA 621 LA Sbjct: 180 LA 181 Score = 122 bits (295), Expect = 2e-28 Identities = 55/60 (91%), Positives = 60/60 (100%) Frame = +2 Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262 +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Score = 84.6 bits (200), Expect = 7e-17 Identities = 47/69 (68%), Positives = 50/69 (72%) Frame = +3 Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689 SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER + Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG-RDLTDYLMKILTERGYSFT-T 202 Query: 690 PPSREIVRD 716 REIVRD Sbjct: 203 TAEREIVRD 211 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 190 bits (464), Expect = 7e-49 Identities = 94/122 (77%), Positives = 95/122 (77%) Frame = +1 Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119 Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLD 615 TQIMFETFN+PAMYVAIQAVLSLY P PHAILRLD Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179 Query: 616 LA 621 LA Sbjct: 180 LA 181 Score = 124 bits (298), Expect = 1e-28 Identities = 56/60 (93%), Positives = 60/60 (100%) Frame = +2 Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262 ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Score = 84.6 bits (200), Expect = 7e-17 Identities = 47/69 (68%), Positives = 50/69 (72%) Frame = +3 Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689 SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER + Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG-RDLTDYLMKILTERGYSFT-T 202 Query: 690 PPSREIVRD 716 REIVRD Sbjct: 203 TAEREIVRD 211 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 190 bits (464), Expect = 7e-49 Identities = 94/122 (77%), Positives = 95/122 (77%) Frame = +1 Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLD 615 TQIMFETFN+PAMYVAIQAVLSLY P PHAILRLD Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180 Query: 616 LA 621 LA Sbjct: 181 LA 182 Score = 130 bits (313), Expect = 1e-30 Identities = 58/62 (93%), Positives = 62/62 (100%) Frame = +2 Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256 MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 257 AK 262 +K Sbjct: 61 SK 62 Score = 84.6 bits (200), Expect = 7e-17 Identities = 47/69 (68%), Positives = 50/69 (72%) Frame = +3 Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689 SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER + Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG-RDLTDYLMKILTERGYSFT-T 203 Query: 690 PPSREIVRD 716 REIVRD Sbjct: 204 TAEREIVRD 212 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 190 bits (462), Expect = 1e-48 Identities = 93/122 (76%), Positives = 95/122 (77%) Frame = +1 Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLD 615 TQIMFETFN+PAMYVAIQAVLSLY P PHAI+RLD Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180 Query: 616 LA 621 LA Sbjct: 181 LA 182 Score = 125 bits (302), Expect = 3e-29 Identities = 57/62 (91%), Positives = 61/62 (98%) Frame = +2 Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256 M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+ Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 257 AK 262 +K Sbjct: 61 SK 62 Score = 84.6 bits (200), Expect = 7e-17 Identities = 47/69 (68%), Positives = 50/69 (72%) Frame = +3 Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689 SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER + Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAG-RDLTDYLMKILTERGYSFT-T 203 Query: 690 PPSREIVRD 716 REIVRD Sbjct: 204 TAEREIVRD 212 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 183 bits (445), Expect = 1e-46 Identities = 83/84 (98%), Positives = 84/84 (100%) Frame = +1 Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507 TQIMFETFN+PAMYVAIQAVLSLY Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLY 144 Score = 125 bits (302), Expect = 3e-29 Identities = 55/62 (88%), Positives = 61/62 (98%) Frame = +2 Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256 M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+ Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 257 AK 262 +K Sbjct: 61 SK 62 Score = 51.6 bits (118), Expect = 6e-07 Identities = 24/28 (85%), Positives = 26/28 (92%), Gaps = 2/28 (7%) Frame = +3 Query: 510 SGRTTGIVLDSGDGVSHTVPIYE--GYA 587 SGRTTGIV+DSGDGVSHTVPIYE GY+ Sbjct: 146 SGRTTGIVMDSGDGVSHTVPIYEERGYS 173 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 124 bits (298), Expect = 1e-28 Identities = 55/60 (91%), Positives = 60/60 (100%) Frame = +2 Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262 D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Score = 84.6 bits (200), Expect = 7e-17 Identities = 47/69 (68%), Positives = 50/69 (72%) Frame = +3 Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689 SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER + Sbjct: 108 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAG-RDLTDYLMKILTERGYSFT-T 165 Query: 690 PPSREIVRD 716 REIVRD Sbjct: 166 TAEREIVRD 174 Score = 64.1 bits (149), Expect = 1e-10 Identities = 28/31 (90%), Positives = 28/31 (90%) Frame = +1 Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 348 SKRGILTLKYPIEHGIVTNWDDMEKI TF Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90 Score = 56.8 bits (131), Expect = 2e-08 Identities = 33/67 (49%), Positives = 37/67 (55%) Frame = +1 Query: 421 NREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHA 600 N + M +IMFETFN+PAMYVAIQAVLSLY P PHA Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137 Query: 601 ILRLDLA 621 I+RLDLA Sbjct: 138 IIRLDLA 144 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 100 bits (240), Expect = 1e-21 Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 1/121 (0%) Frame = +1 Query: 262 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 438 R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124 Query: 439 QIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLDL 618 ++MFE + +Y+AIQAVL+LY + CP PH RLD+ Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDI 184 Query: 619 A 621 A Sbjct: 185 A 185 Score = 50.0 bits (114), Expect = 2e-06 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Frame = +2 Query: 95 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 253 + +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 93.9 bits (223), Expect = 1e-19 Identities = 48/98 (48%), Positives = 61/98 (62%) Frame = +1 Query: 328 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 507 K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188 Query: 508 GPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLDLA 621 + + P PHA R+DLA Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLA 2226 Score = 66.1 bits (154), Expect = 3e-11 Identities = 35/69 (50%), Positives = 43/69 (62%) Frame = +3 Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689 SGRTTG V D GDGVSHTVP+Y+GY LP L RDLT YL +++TER Sbjct: 2190 SGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAG-RDLTHYLQRLVTERGYSFQ-S 2247 Query: 690 PPSREIVRD 716 ++I+RD Sbjct: 2248 TAEQQIIRD 2256 Score = 59.7 bits (138), Expect = 2e-09 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = +2 Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 202 +V+DNGSG CKAG + D++PR VFP+IVGRPRH+ Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130 >SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) Length = 152 Score = 81.0 bits (191), Expect = 9e-16 Identities = 44/69 (63%), Positives = 48/69 (69%) Frame = +3 Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689 SGRTTG+V DSGDGVSH VPIYEGYALP L RDLTDYLMK++TER + Sbjct: 24 SGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAG-RDLTDYLMKLMTERGYSFT-T 81 Query: 690 PPSREIVRD 716 REIVRD Sbjct: 82 TAEREIVRD 90 Score = 50.8 bits (116), Expect = 1e-06 Identities = 30/60 (50%), Positives = 33/60 (55%) Frame = +1 Query: 442 IMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLDLA 621 IMFE FN+PA+YVAIQAVLSLY + P PHAILRLDLA Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 76.6 bits (180), Expect = 2e-14 Identities = 37/82 (45%), Positives = 49/82 (59%) Frame = +1 Query: 376 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVS 555 +HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLY Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185 Query: 556 PTPCPSTRDTHFPHAILRLDLA 621 P PH+I+R D+A Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIA 207 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 64.9 bits (151), Expect = 6e-11 Identities = 26/74 (35%), Positives = 47/74 (63%) Frame = +1 Query: 286 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 465 PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62 Query: 466 PAMYVAIQAVLSLY 507 PA ++ +VL+ + Sbjct: 63 PAFFLCKNSVLTAF 76 Score = 33.9 bits (74), Expect = 0.13 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +3 Query: 501 AVRSGRTTGIVLDSGDGVSHTVPIYEGYAL 590 A +GR+ G+V+DSG + VP+++GY L Sbjct: 75 AFANGRSNGLVIDSGATQTSAVPVHDGYVL 104 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 59.7 bits (138), Expect = 2e-09 Identities = 27/39 (69%), Positives = 29/39 (74%) Frame = +2 Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 202 E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 52.8 bits (121), Expect = 3e-07 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Frame = +2 Query: 71 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 241 FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752 Query: 242 GDEARAK 262 GD A AK Sbjct: 753 GDAAVAK 759 >SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) Length = 543 Score = 47.2 bits (107), Expect = 1e-05 Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 3/60 (5%) Frame = +3 Query: 522 TGIVLDSGDGVSHTVPIYEGYALPP--RH-PASGLGPVRDLTDYLMKILTERRLLVSLPP 692 TG V+DSGDGV+H +P+ EGY + +H P +G RD+T ++ ++L ER + +PP Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG----RDITFFVQQLLREREM--GIPP 115 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 46.0 bits (104), Expect = 3e-05 Identities = 18/38 (47%), Positives = 23/38 (60%) Frame = +1 Query: 280 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 393 K+PI H IV +WD ME+ W + LR PE+H LL Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336 Score = 32.3 bits (70), Expect = 0.40 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +3 Query: 522 TGIVLDSGDGVSHTVPI 572 TG V+DSGDGV+H +P+ Sbjct: 356 TGCVIDSGDGVTHVIPV 372 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 34.7 bits (76), Expect = 0.076 Identities = 18/39 (46%), Positives = 25/39 (64%) Frame = -3 Query: 199 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 83 MA + D G++ + SI+S E GLAHTGAI+ Q + V Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39 >SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) Length = 458 Score = 31.9 bits (69), Expect = 0.53 Identities = 22/71 (30%), Positives = 31/71 (43%) Frame = +3 Query: 360 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRSGRTTGIVLD 539 ACR R PR P P+ + ++D D +I R P R + V +T G+ + Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260 Query: 540 SGDGVSHTVPI 572 G H VPI Sbjct: 261 ITGGKEHGVPI 271 >SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 220 Score = 31.5 bits (68), Expect = 0.71 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +1 Query: 277 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 429 L+ P + +VT+++ E++ H F + P HPV++TE NP R+ Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183 >SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 120 Score = 31.5 bits (68), Expect = 0.71 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 174 GNTARGASSPAKPALHIPEPLSTT 103 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 31.5 bits (68), Expect = 0.71 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 174 GNTARGASSPAKPALHIPEPLSTT 103 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) Length = 563 Score = 31.1 bits (67), Expect = 0.93 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +2 Query: 446 CSKHSTRPPCTSPSKPCSRCTVRSYHRYRAG 538 C H+ R P T+PS PC S Y AG Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390 >SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 30.3 bits (65), Expect = 1.6 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 174 GNTARGASSPAKPALHIPEPLSTT 103 GNT R PAKP+L++P P S T Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563 >SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1259 Score = 30.3 bits (65), Expect = 1.6 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +3 Query: 402 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 494 SP P+ R D+P V A HV HPSR Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295 >SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) Length = 580 Score = 29.9 bits (64), Expect = 2.2 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 286 PIEHGIVTNWDDMEKIWHHTFYNE 357 P + G + NWD ++IW +TF E Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315 Score = 27.9 bits (59), Expect = 8.7 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +2 Query: 89 EVAALVVDNGSGMCKAGFAGDDAPRAV 169 ++A LV+D G+ K GFA + APR++ Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258 >SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 886 Score = 29.5 bits (63), Expect = 2.8 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = +1 Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516 Y +L V +PV T+ + + N + TQ+M T P Y + V + Y PV Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLM-VFTRYNPV 170 Score = 27.9 bits (59), Expect = 8.7 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +1 Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516 Y EL V +PV TE + + N + Q+M T P Y + V + Y PV Sbjct: 475 YTELVVFTRYNPVRYTELVVFTRHNPVRYAQLMVFTRYNPVRYAQL-IVFTRYNPV 529 >SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 5659 Score = 29.5 bits (63), Expect = 2.8 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Frame = +1 Query: 343 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522 T E VAPE + E+ L + +T + ET TP VA + + G + P Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972 Query: 523 PVSCWTPATVSP--TPCPST 576 + TV+P T P T Sbjct: 4973 ETTMAPETTVAPETTMAPET 4992 Score = 28.3 bits (60), Expect = 6.6 Identities = 21/88 (23%), Positives = 33/88 (37%) Frame = +1 Query: 343 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522 T E VAPE + E ++P+ T + ET TP VA + ++ V Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239 Query: 523 PVSCWTPATVSPTPCPSTRDTHFPHAIL 606 + TV+P + T P + Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAPETTM 4267 >SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 405 Score = 29.5 bits (63), Expect = 2.8 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 485 SKPCSRCTVRSYH--RYRAGLRRRCLPHRAHLRGIRTSPT 598 S PC+ C H + L R PHR LRG +T+P+ Sbjct: 352 SPPCASCQQYDNHAMNFDVLLNGRSYPHRTPLRGNQTTPS 391 >SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3) Length = 532 Score = 29.5 bits (63), Expect = 2.8 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%) Frame = -2 Query: 581 SLVDGHGVGDT-VAGVQHDTGGTTGPYSEST 492 +LV+G GV T ++ +QH T TTGPY + + Sbjct: 404 NLVEGKGVSRTAISALQHWTWFTTGPYVDES 434 >SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) Length = 439 Score = 29.1 bits (62), Expect = 3.8 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Frame = +1 Query: 382 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSP- 558 PVL A P A + TQ + P ++ V + P PPV P TV P Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPP 81 Query: 559 --TPCPST 576 T P+T Sbjct: 82 VVTDAPTT 89 >SB_23912| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 724 Score = 29.1 bits (62), Expect = 3.8 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -2 Query: 638 CEVTDRAKSRRRMAWGKCVSLVDGHG 561 C D+ KS WG+CV DG G Sbjct: 445 CTQKDQCKSNYLCTWGRCVRNADGEG 470 >SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2162 Score = 29.1 bits (62), Expect = 3.8 Identities = 13/45 (28%), Positives = 16/45 (35%) Frame = -3 Query: 175 GKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCD 41 G+HC + I C G GA GN+ E C D Sbjct: 724 GRHCEKDIDECSLGYCKNGATCTNTPGNYSCQCTEFTNGTNCELD 768 >SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) Length = 812 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +2 Query: 596 TPSCVWTWPGP*PHRLPHEDPHRAPATRFTTTAEPGN 706 +PSC ++P P P P P AP R A P N Sbjct: 514 SPSCCGSYPAPQPPSPPAPPPKPAPPPRSPPAAAPCN 550 >SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1430 Score = 29.1 bits (62), Expect = 3.8 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 3/31 (9%) Frame = +2 Query: 563 RAHLRGIRTSPTPSC---VWTWPGP*PHRLP 646 RA L RT P P+C VW P P H LP Sbjct: 1243 RASLGAPRTQPIPACPHLVWATPQPVNHTLP 1273 >SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) Length = 3445 Score = 29.1 bits (62), Expect = 3.8 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%) Frame = +1 Query: 355 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522 E APE V T AP + P+ +T + ET PA A++ +L +VP Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382 Query: 523 PVSCWTPATVSP--TPCPST 576 + + TV+P T P+T Sbjct: 1383 ETTASSETTVAPETTDAPAT 1402 >SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) Length = 481 Score = 28.7 bits (61), Expect = 5.0 Identities = 11/44 (25%), Positives = 21/44 (47%) Frame = +1 Query: 451 ETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRD 582 + + P + +Q +++ P + P +C TP +SP T D Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331 >SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) Length = 635 Score = 28.7 bits (61), Expect = 5.0 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +1 Query: 199 SGRDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNW--DDMEKIWHHTFYN 354 +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+HT N Sbjct: 451 TGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYHTCPN 500 >SB_44542| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 486 Score = 28.3 bits (60), Expect = 6.6 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +3 Query: 621 PVRDLTDYLMKILTERRLLVSLPPPSREI 707 PV+ + L++ ER+L +SLPPP ++I Sbjct: 26 PVQITAEQLLREAKERQLELSLPPPKQKI 54 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 28.3 bits (60), Expect = 6.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -1 Query: 174 GNTARGASSPAKPALHIPEPLSTT 103 GNT R AKPAL++P P S T Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63 >SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 635 Score = 28.3 bits (60), Expect = 6.6 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -1 Query: 174 GNTARGASSPAKPALHIPEPLSTT 103 GNT R PAKP L IP P + T Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91 >SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 604 Score = 27.9 bits (59), Expect = 8.7 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -2 Query: 329 FSMSSQLVTIPCSMGYLRVRIPLLLVPHLLHKSPSVP 219 F +S LVT S + + P LLVPH L K S+P Sbjct: 571 FEISPPLVT---SSSHSLTQSPTLLVPHRLKKKESIP 604 >SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1065 Score = 27.9 bits (59), Expect = 8.7 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 9/88 (10%) Frame = +1 Query: 361 RVAPEEHPVLLTEAPLNPKANREKMTQIMFET----FNTPAMYVAIQAVLSLYGPVVP-- 522 ++A + +P + E N K + +K+ Q M +T +N P + L + P +P Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTLLYNMPKIMRKFAFELPNWAPKIPLP 925 Query: 523 ---PVSCWTPATVSPTPCPSTRDTHFPH 597 P T A +P+ D + PH Sbjct: 926 TEPPTEKMTEAPTTPSAVHGEEDKNKPH 953 >SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) Length = 839 Score = 27.9 bits (59), Expect = 8.7 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 4/84 (4%) Frame = +1 Query: 355 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522 E VAPE L E P+ + +T P VAI++ L+L V P Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78 Query: 523 PVSCWTPATVSPTPCPSTRDTHFP 594 + T TV+P + T P Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102 >SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1308 Score = 27.9 bits (59), Expect = 8.7 Identities = 15/58 (25%), Positives = 24/58 (41%) Frame = +1 Query: 400 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPS 573 A P A + + +NTP ++ + P +PP + TP+ P P PS Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQA--PPTLPPTTLTTPSWSQPVPVPS 943 >SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 221 Score = 27.9 bits (59), Expect = 8.7 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = -2 Query: 251 PHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 81 P L +P + RPS + S + LL RP TYR+ LP+ LL + Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,245,550 Number of Sequences: 59808 Number of extensions: 675384 Number of successful extensions: 2415 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 2061 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2392 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1901817086 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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