Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0911
(717 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 7e-49
SB_56| Best HMM Match : Actin (HMM E-Value=0) 190 7e-49
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 190 7e-49
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 1e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 1e-28
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 94 1e-19
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 81 9e-16
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 77 2e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 65 6e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 53 3e-07
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 47 1e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.076
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 32 0.53
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.71
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.93
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.2
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3) 29 2.8
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 3.8
SB_23912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 3.8
SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 3.8
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 29 5.0
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 5.0
SB_44542| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 8.7
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 190 bits (464), Expect = 7e-49
Identities = 94/122 (77%), Positives = 95/122 (77%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLD 615
TQIMFETFN+PAMYVAIQAVLSLY P PHAILRLD
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
Query: 616 LA 621
LA
Sbjct: 180 LA 181
Score = 122 bits (295), Expect = 2e-28
Identities = 55/60 (91%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 84.6 bits (200), Expect = 7e-17
Identities = 47/69 (68%), Positives = 50/69 (72%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689
SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER +
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG-RDLTDYLMKILTERGYSFT-T 202
Query: 690 PPSREIVRD 716
REIVRD
Sbjct: 203 TAEREIVRD 211
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 190 bits (464), Expect = 7e-49
Identities = 94/122 (77%), Positives = 95/122 (77%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLD 615
TQIMFETFN+PAMYVAIQAVLSLY P PHAILRLD
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
Query: 616 LA 621
LA
Sbjct: 180 LA 181
Score = 124 bits (298), Expect = 1e-28
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 84.6 bits (200), Expect = 7e-17
Identities = 47/69 (68%), Positives = 50/69 (72%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689
SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER +
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG-RDLTDYLMKILTERGYSFT-T 202
Query: 690 PPSREIVRD 716
REIVRD
Sbjct: 203 TAEREIVRD 211
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 190 bits (464), Expect = 7e-49
Identities = 94/122 (77%), Positives = 95/122 (77%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLD 615
TQIMFETFN+PAMYVAIQAVLSLY P PHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 616 LA 621
LA
Sbjct: 181 LA 182
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
Score = 84.6 bits (200), Expect = 7e-17
Identities = 47/69 (68%), Positives = 50/69 (72%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689
SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER +
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG-RDLTDYLMKILTERGYSFT-T 203
Query: 690 PPSREIVRD 716
REIVRD
Sbjct: 204 TAEREIVRD 212
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 190 bits (462), Expect = 1e-48
Identities = 93/122 (76%), Positives = 95/122 (77%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLD 615
TQIMFETFN+PAMYVAIQAVLSLY P PHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 616 LA 621
LA
Sbjct: 181 LA 182
Score = 125 bits (302), Expect = 3e-29
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
Score = 84.6 bits (200), Expect = 7e-17
Identities = 47/69 (68%), Positives = 50/69 (72%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689
SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER +
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAG-RDLTDYLMKILTERGYSFT-T 203
Query: 690 PPSREIVRD 716
REIVRD
Sbjct: 204 TAEREIVRD 212
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (445), Expect = 1e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLY 144
Score = 125 bits (302), Expect = 3e-29
Identities = 55/62 (88%), Positives = 61/62 (98%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/28 (85%), Positives = 26/28 (92%), Gaps = 2/28 (7%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYE--GYA 587
SGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 146 SGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 124 bits (298), Expect = 1e-28
Identities = 55/60 (91%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 84.6 bits (200), Expect = 7e-17
Identities = 47/69 (68%), Positives = 50/69 (72%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689
SGRTTGIV+DSGDGV+HTVPIYEGYALP L RDLTDYLMKILTER +
Sbjct: 108 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAG-RDLTDYLMKILTERGYSFT-T 165
Query: 690 PPSREIVRD 716
REIVRD
Sbjct: 166 TAEREIVRD 174
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 348
SKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/67 (49%), Positives = 37/67 (55%)
Frame = +1
Query: 421 NREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHA 600
N + M +IMFETFN+PAMYVAIQAVLSLY P PHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 601 ILRLDLA 621
I+RLDLA
Sbjct: 138 IIRLDLA 144
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 100 bits (240), Expect = 1e-21
Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Frame = +1
Query: 262 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 438
R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 439 QIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLDL 618
++MFE + +Y+AIQAVL+LY + CP PH RLD+
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDI 184
Query: 619 A 621
A
Sbjct: 185 A 185
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 253
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 93.9 bits (223), Expect = 1e-19
Identities = 48/98 (48%), Positives = 61/98 (62%)
Frame = +1
Query: 328 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 507
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 508 GPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLDLA 621
+ + P PHA R+DLA
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLA 2226
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689
SGRTTG V D GDGVSHTVP+Y+GY LP L RDLT YL +++TER
Sbjct: 2190 SGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAG-RDLTHYLQRLVTERGYSFQ-S 2247
Query: 690 PPSREIVRD 716
++I+RD
Sbjct: 2248 TAEQQIIRD 2256
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 202
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 81.0 bits (191), Expect = 9e-16
Identities = 44/69 (63%), Positives = 48/69 (69%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPPRHPASGLGPVRDLTDYLMKILTERRLLVSLP 689
SGRTTG+V DSGDGVSH VPIYEGYALP L RDLTDYLMK++TER +
Sbjct: 24 SGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAG-RDLTDYLMKLMTERGYSFT-T 81
Query: 690 PPSREIVRD 716
REIVRD
Sbjct: 82 TAEREIVRD 90
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/60 (50%), Positives = 33/60 (55%)
Frame = +1
Query: 442 IMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILRLDLA 621
IMFE FN+PA+YVAIQAVLSLY + P PHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +1
Query: 376 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVS 555
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLY
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 556 PTPCPSTRDTHFPHAILRLDLA 621
P PH+I+R D+A
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIA 207
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.9 bits (151), Expect = 6e-11
Identities = 26/74 (35%), Positives = 47/74 (63%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 465
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 466 PAMYVAIQAVLSLY 507
PA ++ +VL+ +
Sbjct: 63 PAFFLCKNSVLTAF 76
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 501 AVRSGRTTGIVLDSGDGVSHTVPIYEGYAL 590
A +GR+ G+V+DSG + VP+++GY L
Sbjct: 75 AFANGRSNGLVIDSGATQTSAVPVHDGYVL 104
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 202
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +2
Query: 71 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 241
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 242 GDEARAK 262
GD A AK
Sbjct: 753 GDAAVAK 759
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = +3
Query: 522 TGIVLDSGDGVSHTVPIYEGYALPP--RH-PASGLGPVRDLTDYLMKILTERRLLVSLPP 692
TG V+DSGDGV+H +P+ EGY + +H P +G RD+T ++ ++L ER + +PP
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG----RDITFFVQQLLREREM--GIPP 115
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 280 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 393
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 522 TGIVLDSGDGVSHTVPI 572
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.076
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 199 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 83
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +3
Query: 360 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRSGRTTGIVLD 539
ACR R PR P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 540 SGDGVSHTVPI 572
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.71
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 277 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 429
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 446 CSKHSTRPPCTSPSKPCSRCTVRSYHRYRAG 538
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 402 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 494
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNE 357
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 89 EVAALVVDNGSGMCKAGFAGDDAPRAV 169
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516
Y +L V +PV T+ + + N + TQ+M T P Y + V + Y PV
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLM-VFTRYNPV 170
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516
Y EL V +PV TE + + N + Q+M T P Y + V + Y PV
Sbjct: 475 YTELVVFTRYNPVRYTELVVFTRHNPVRYAQLMVFTRYNPVRYAQL-IVFTRYNPV 529
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +1
Query: 343 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522
T E VAPE + E+ L + +T + ET TP VA + + G + P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 523 PVSCWTPATVSP--TPCPST 576
+ TV+P T P T
Sbjct: 4973 ETTMAPETTVAPETTMAPET 4992
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/88 (23%), Positives = 33/88 (37%)
Frame = +1
Query: 343 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522
T E VAPE + E ++P+ T + ET TP VA + ++ V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 523 PVSCWTPATVSPTPCPSTRDTHFPHAIL 606
+ TV+P + T P +
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAPETTM 4267
>SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 485 SKPCSRCTVRSYH--RYRAGLRRRCLPHRAHLRGIRTSPT 598
S PC+ C H + L R PHR LRG +T+P+
Sbjct: 352 SPPCASCQQYDNHAMNFDVLLNGRSYPHRTPLRGNQTTPS 391
>SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 532
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -2
Query: 581 SLVDGHGVGDT-VAGVQHDTGGTTGPYSEST 492
+LV+G GV T ++ +QH T TTGPY + +
Sbjct: 404 NLVEGKGVSRTAISALQHWTWFTTGPYVDES 434
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +1
Query: 382 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSP- 558
PVL A P A + TQ + P ++ V + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPP 81
Query: 559 --TPCPST 576
T P+T
Sbjct: 82 VVTDAPTT 89
>SB_23912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 638 CEVTDRAKSRRRMAWGKCVSLVDGHG 561
C D+ KS WG+CV DG G
Sbjct: 445 CTQKDQCKSNYLCTWGRCVRNADGEG 470
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = -3
Query: 175 GKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCD 41
G+HC + I C G GA GN+ E C D
Sbjct: 724 GRHCEKDIDECSLGYCKNGATCTNTPGNYSCQCTEFTNGTNCELD 768
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 596 TPSCVWTWPGP*PHRLPHEDPHRAPATRFTTTAEPGN 706
+PSC ++P P P P P AP R A P N
Sbjct: 514 SPSCCGSYPAPQPPSPPAPPPKPAPPPRSPPAAAPCN 550
>SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +2
Query: 563 RAHLRGIRTSPTPSC---VWTWPGP*PHRLP 646
RA L RT P P+C VW P P H LP
Sbjct: 1243 RASLGAPRTQPIPACPHLVWATPQPVNHTLP 1273
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = +1
Query: 355 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522
E APE V T AP + P+ +T + ET PA A++ +L +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 523 PVSCWTPATVSP--TPCPST 576
+ + TV+P T P+T
Sbjct: 1383 ETTASSETTVAPETTDAPAT 1402
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 451 ETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRD 582
+ + P + +Q +++ P + P +C TP +SP T D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 199 SGRDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNW--DDMEKIWHHTFYN 354
+GR+ G+ +CR+ K ++TL + I G+ + D EK+W+HT N
Sbjct: 451 TGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYHTCPN 500
>SB_44542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 621 PVRDLTDYLMKILTERRLLVSLPPPSREI 707
PV+ + L++ ER+L +SLPPP ++I
Sbjct: 26 PVQITAEQLLREAKERQLELSLPPPKQKI 54
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 329 FSMSSQLVTIPCSMGYLRVRIPLLLVPHLLHKSPSVP 219
F +S LVT S + + P LLVPH L K S+P
Sbjct: 571 FEISPPLVT---SSSHSLTQSPTLLVPHRLKKKESIP 604
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Frame = +1
Query: 361 RVAPEEHPVLLTEAPLNPKANREKMTQIMFET----FNTPAMYVAIQAVLSLYGPVVP-- 522
++A + +P + E N K + +K+ Q M +T +N P + L + P +P
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTLLYNMPKIMRKFAFELPNWAPKIPLP 925
Query: 523 ---PVSCWTPATVSPTPCPSTRDTHFPH 597
P T A +P+ D + PH
Sbjct: 926 TEPPTEKMTEAPTTPSAVHGEEDKNKPH 953
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 8.7
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Frame = +1
Query: 355 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522
E VAPE L E P+ + +T P VAI++ L+L V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 523 PVSCWTPATVSPTPCPSTRDTHFP 594
+ T TV+P + T P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +1
Query: 400 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPS 573
A P A + + +NTP ++ + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQA--PPTLPPTTLTTPSWSQPVPVPS 943
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 251 PHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 81
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,245,550
Number of Sequences: 59808
Number of extensions: 675384
Number of successful extensions: 2415
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2392
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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