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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0910
         (616 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ...    32   0.057
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo...    29   0.71 
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ...    28   0.93 
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha...    28   0.93 
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch...    28   1.2  
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch...    28   1.2  
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha...    28   1.2  
SPBC16E9.01c |php4|SPBP16F5.09c|CCAAT-binding factor complex sub...    27   1.6  
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar...    27   2.2  
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy...    27   2.8  
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr...    27   2.8  
SPBC800.10c |||EPS15 repeat family actin cortical patch componen...    26   3.8  
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa...    26   5.0  
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s...    26   5.0  
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula...    26   5.0  
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha...    25   6.6  
SPAC22A12.12c |||exosome subunit Rrp40 |Schizosaccharomyces pomb...    25   6.6  
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce...    25   6.6  
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac...    25   8.7  
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb...    25   8.7  
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce...    25   8.7  
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po...    25   8.7  

>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 817

 Score = 32.3 bits (70), Expect = 0.057
 Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
 Frame = +3

Query: 264 EKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHD-RQEELNDLLAKLDELQAQAKNDV 440
           E   ++ RL  E +  L  ++EG       ++  HD  ++ L   +  L E     K  +
Sbjct: 317 ENELKISRLQEEKDSLLKKVQEGASLAMQRVQNKHDLEKKRLQSAIQPLQEENNSLKQQI 376

Query: 441 ELTKATLTAANEIYKTLKEFSDQ*PSRTSK 530
           E  +  L +   + + LK   DQ  +   K
Sbjct: 377 EQLQRELASETVVKENLKSSLDQQSANVQK 406


>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
           Tip1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 461

 Score = 28.7 bits (61), Expect = 0.71
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 336 RRGRDLLEQGHDRQEELNDLLAKLDELQAQAKN 434
           +R  DLL +  + Q++L ++LA +D+LQ+   N
Sbjct: 140 KRIEDLLYERQNHQQQLEEVLATVDQLQSLVTN 172


>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1854

 Score = 28.3 bits (60), Expect = 0.93
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 370  TGRRNSTISSLSWMSCRRKLKTMWNSRKPR*QP 468
            TG    T    +W+  RRK+K+M  S++P  +P
Sbjct: 1220 TGSAFFTAEQRAWLELRRKIKSMRPSKRPAIRP 1252


>SPAC139.05 |||succinate-semialdehyde dehydrogenase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 493

 Score = 28.3 bits (60), Expect = 0.93
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 438 VELTKATLTAANEIYKTLKEFS 503
           VE TK  ++AANE +KT K F+
Sbjct: 54  VEETKKAISAANEAFKTYKNFT 75


>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 161

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 19/85 (22%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +3

Query: 258 IDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEE-LNDLLAKLDELQAQAKN 434
           ++E++ +L RL A+NED      E + R  +LLE+  +  ++ L +   K+ +   +A++
Sbjct: 60  LEEETKQL-RLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEH 118

Query: 435 DVELTKATLTAANEIYKTLKEFSDQ 509
                ++     +++ + L+E +D+
Sbjct: 119 FERRVQSLERERDDMEQKLEEMTDK 143


>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1030

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
 Frame = -3

Query: 515 RSLITELF*SLVNLICGCQRGFREFHIVFSLRLQ--------LIQLSEEIVEFL 378
           + L+TE+F S +N +    RG R+F  + SL L+        L+ + +E+VE L
Sbjct: 401 KELVTEIFDSAINQLSEEDRGLRQFEEMRSLLLRGIGIHHSGLLPILKELVEIL 454


>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 4196

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 14/56 (25%), Positives = 32/56 (57%)
 Frame = +3

Query: 258  IDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQ 425
            ++  ++E+DRL  E ++    ++E I   +DL E+    QEE   +++++  ++ Q
Sbjct: 3324 LEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQEEYASMISEIHSMELQ 3379


>SPBC16E9.01c |php4|SPBP16F5.09c|CCAAT-binding factor complex
           subunit Php4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 295

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 375 QEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYK 485
           Q+E N+LL +L+ LQAQ KN    +   +   +E+ K
Sbjct: 87  QKENNELLEQLEMLQAQLKNSTLDSPKEVEVNSEVVK 123


>SPCC1672.02c |sap1||switch-activating protein
           Sap1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 254

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +3

Query: 261 DEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAK 431
           DE +  L +L  E +    N++  + +   L +  HD +E+L  + AK+DE+ A+ K
Sbjct: 144 DEINERLKKLTEEQQ----NVDMLVAKVNFLSKHLHDNEEKLMQVNAKMDEVLAENK 196


>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1115

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 19/75 (25%), Positives = 36/75 (48%)
 Frame = +3

Query: 273 AELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTK 452
           AE+D L  ENE+     ++ I      L + +D +  LN+ +  L++  +Q K ++E   
Sbjct: 659 AEVDSLRKENEEN----KQVIALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEMESVT 714

Query: 453 ATLTAANEIYKTLKE 497
            +  +  +    LKE
Sbjct: 715 TSKESLADYLSNLKE 729


>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 872

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 378 EELNDLLAKLDELQAQAKNDVELTKATLTAANEIYK 485
           E  N   A L       KN++ LT A L + +EIYK
Sbjct: 142 ENTNVCKASLYRFMLMCKNELGLTDAALFSISEIYK 177


>SPBC800.10c |||EPS15 repeat family actin cortical patch component
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1116

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 16/64 (25%), Positives = 34/64 (53%)
 Frame = +3

Query: 264 EKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVE 443
           +K   L++++AE+E   + +E      + L  +  D+++ L  L  +LDE+  +  +  E
Sbjct: 591 QKGEVLEQVVAESEAAKNMVESSNASIQQLKSEVADKEQTLAQLHLQLDEMTQRLVSLDE 650

Query: 444 LTKA 455
            +KA
Sbjct: 651 ESKA 654


>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
           Brl2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 680

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 258 IDEKSAELDRLIAENEDTLHNLE 326
           +D    E+D+LI E E+ L+N+E
Sbjct: 261 LDSNVNEMDKLIMERENALNNVE 283


>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
           subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 657

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 19/78 (24%), Positives = 34/78 (43%)
 Frame = +3

Query: 270 SAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELT 449
           S++  +L  E E  L   EE      DL+     +Q+ LN++     EL    KN+   +
Sbjct: 458 SSKFSQLAEEYESQLREKEE------DLIRANRLKQDTLNEISRTYQELTFLQKNNPTYS 511

Query: 450 KATLTAANEIYKTLKEFS 503
           ++      E  +T ++ S
Sbjct: 512 QSMENLIREAQETYQQLS 529


>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
            protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1400

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 357  EQGHDRQEELNDLLAKLDELQAQAKN 434
            +  H   E+++D+L  +DEL++ +KN
Sbjct: 1042 QANHQSSEKMSDILKGVDELRSVSKN 1067


>SPCC1322.14c |vtc4||vacuolar transporter chaperone
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 721

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 14/82 (17%), Positives = 41/82 (50%)
 Frame = +3

Query: 261 DEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDV 440
           +E  ++   L+ +  D +++ ++   +  +++E+    +E+ ++++ +LD      +ND 
Sbjct: 40  EEDESDFVELLEKELDKVYSFQKN--KSAEVMERIRFCEEQTDEVVRRLDSDNPPNENDF 97

Query: 441 ELTKATLTAANEIYKTLKEFSD 506
            + +  LT        L +FS+
Sbjct: 98  AILETELTDIMATVHDLAKFSE 119


>SPAC22A12.12c |||exosome subunit Rrp40 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 240

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +3

Query: 306 DTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVEL---TKATLTAANE 476
           D++ + +  IR G  L+ Q  DR+EE+  +++K   L    KN + +   TK  + A N+
Sbjct: 21  DSIISQDGSIRLGPGLVFQKKDREEEI--VVSKAGRLHQTGKNAMLIDSRTKRYIPATND 78


>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1957

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = +3

Query: 294  AENEDTLHNLEEGIRRGR----DLLEQGHDRQEELNDLLAKLDEL--QAQAKNDVELTKA 455
            AE  + +H+LEEG    +    +L  +  D Q   N L  +LD L  + + K DV   K 
Sbjct: 1358 AEMTENIHSLEEGKEETKKEIAELSSRLEDNQLATNKLKNQLDHLNQEIRLKEDVLKEKE 1417

Query: 456  TLTAANE 476
            +L  + E
Sbjct: 1418 SLIISLE 1424


>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
           Cut14|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1172

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 258 IDEKSAELDRLIAENEDTLHNLEEGIRRGR-DLLEQGHDRQEELNDLLAKLDE 413
           + ++  ELDRLI +++  +  +E  ++  + +   +  + ++E N    KLDE
Sbjct: 756 LKQRLPELDRLILQSDQAIKKIERDMQEWKHNKGSKMAELEKEFNQYKHKLDE 808


>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 394

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 373 GRRNSTISSLSWMSCRRKLKTMWN 444
           G  +ST+ SLS    R K K  WN
Sbjct: 337 GHASSTVGSLSKEEARFKAKAKWN 360


>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 2310

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +1

Query: 10  NKIAKDGINKQANISNEV---QILTNELNAASGKLNSMTELADQALK 141
           +K+ K  + K   + NE    Q++T      SGK N +  +AD+A K
Sbjct: 359 DKLPKQHLFKYRPVDNEATYCQVVTVTGEKGSGKSNLLNAVADEARK 405


>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1159

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 288 LIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELT 449
           +  + +D  H L     R R  LE+GH +     D    LDE+ A  ++DV  T
Sbjct: 311 MFIDKQDIYHRLSTPTSRKRQTLEKGHIKAFSAVD--EDLDEIFA-CEDDVHYT 361


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,051,650
Number of Sequences: 5004
Number of extensions: 35127
Number of successful extensions: 166
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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