Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0910
(616 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 71 2e-14
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 71 2e-14
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 71 2e-14
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 71 2e-14
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 71 2e-14
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 28 0.21
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 24 3.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 4.5
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 71.3 bits (167), Expect = 2e-14
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 7 ANKIAKDGINKQANISNEVQI-LTNELNAASGKLNSMTELADQALKRARAVYDEALGLYA 183
A K A D N+QANI+ E+ +++E+ A KLN++++L +QAL RAR V DEAL L+A
Sbjct: 83 ALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEALTLFA 142
Query: 184 EVNTTLLPDIKLNKLHEDSMEMNRRLMR 267
VN T P+I ++K+ +++ + NR R
Sbjct: 143 AVNRTAPPNIDIDKIKKEANQYNREADR 170
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 71.3 bits (167), Expect = 2e-14
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 7 ANKIAKDGINKQANISNEVQI-LTNELNAASGKLNSMTELADQALKRARAVYDEALGLYA 183
A K A D N+QANI+ E+ +++E+ A KLN++++L +QAL RAR V DEAL L+A
Sbjct: 83 ALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEALTLFA 142
Query: 184 EVNTTLLPDIKLNKLHEDSMEMNRRLMR 267
VN T P+I ++K+ +++ + NR R
Sbjct: 143 AVNRTAPPNIDIDKIKKEANQYNREADR 170
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 71.3 bits (167), Expect = 2e-14
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 7 ANKIAKDGINKQANISNEVQI-LTNELNAASGKLNSMTELADQALKRARAVYDEALGLYA 183
A K A D N+QANI+ E+ +++E+ A KLN++++L +QAL RAR V DEAL L+A
Sbjct: 83 ALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEALTLFA 142
Query: 184 EVNTTLLPDIKLNKLHEDSMEMNRRLMR 267
VN T P+I ++K+ +++ + NR R
Sbjct: 143 AVNRTAPPNIDIDKIKKEANQYNREADR 170
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 71.3 bits (167), Expect = 2e-14
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 7 ANKIAKDGINKQANISNEVQI-LTNELNAASGKLNSMTELADQALKRARAVYDEALGLYA 183
A K A D N+QANI+ E+ +++E+ A KLN++++L +QAL RAR V DEAL L+A
Sbjct: 83 ALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEALTLFA 142
Query: 184 EVNTTLLPDIKLNKLHEDSMEMNRRLMR 267
VN T P+I ++K+ +++ + NR R
Sbjct: 143 AVNRTAPPNIDIDKIKKEANQYNREADR 170
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 71.3 bits (167), Expect = 2e-14
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 7 ANKIAKDGINKQANISNEVQI-LTNELNAASGKLNSMTELADQALKRARAVYDEALGLYA 183
A K A D N+QANI+ E+ +++E+ A KLN++++L +QAL RAR V DEAL L+A
Sbjct: 1222 ALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEALTLFA 1281
Query: 184 EVNTTLLPDIKLNKLHEDSMEMNRRLMR 267
VN T P+I ++K+ +++ + NR R
Sbjct: 1282 AVNRTAPPNIDIDKIKKEANQYNREADR 1309
Score = 27.1 bits (57), Expect = 0.48
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 255 TIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAK----LDELQA 422
T +K AE +AEN N + RDL H ++LN LAK L+E +A
Sbjct: 1442 TAQDKYAEEASKLAENIKKRANATKNT--ARDL----HHEADQLNGRLAKTDNRLEEREA 1495
Query: 423 QAKNDVELT 449
Q + D+ LT
Sbjct: 1496 QIRKDLNLT 1504
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 28.3 bits (60), Expect = 0.21
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 261 DEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELND 392
DE+ E L+ E+E L + E +R D L+ + +EEL++
Sbjct: 169 DERKEESMNLLRESEGKLEKISEYLRTIEDRLKTLEEEKEELSE 212
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 24.2 bits (50), Expect = 3.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 90 GFGKTEQYDRACRSSFKESQSCV 158
GF +T YD A F E + CV
Sbjct: 99 GFQRTSPYDSAMDFQFGEGRECV 121
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.8 bits (49), Expect = 4.5
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +3
Query: 276 ELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKA 455
E D++ + ++++E R +L EQ D QE+L+ +++ Q + ELT
Sbjct: 627 ECDKIRNQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTAR 686
Query: 456 TLTAANEIYK 485
+ E K
Sbjct: 687 LVNVDEEKVK 696
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,766
Number of Sequences: 2352
Number of extensions: 8111
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -