Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0910
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   2.4  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   5.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.2  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 387 NDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQ 509
           N++   + E  A +  D+ L  + L      YKTLKE  ++
Sbjct: 95  NEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIMNE 135


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 390 DLLAKLDELQAQAKNDVELTKATLTAANEIYKT 488
           DL   +DE +   +ND E  ++ +  A   Y T
Sbjct: 316 DLREAIDEFKTPMRNDSERNRSPVRPATVQYDT 348


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 172 LKLRHTQLWL 143
           L LRHT++WL
Sbjct: 220 LHLRHTKIWL 229


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 214 KLNKLHEDSMEMNRR 258
           KLNK+H+   ++N+R
Sbjct: 75  KLNKIHDAYKDLNQR 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,206
Number of Sequences: 438
Number of extensions: 2703
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)