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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0910
         (616 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g73570.1 68414.m08517 suppressor of lin-12-like protein-relat...    33   0.15 
At5g46460.1 68418.m05722 pentatricopeptide (PPR) repeat-containi...    33   0.20 
At2g45460.1 68415.m05654 forkhead-associated domain-containing p...    32   0.35 
At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein...    31   0.61 
At1g22260.1 68414.m02782 expressed protein                             31   0.80 
At2g27170.1 68415.m06029 structural maintenance of chromosomes (...    30   1.1  
At4g38710.1 68417.m05483 glycine-rich protein cylicin II - bovin...    29   1.9  
At2g37080.1 68415.m04550 myosin heavy chain-related low similari...    29   1.9  
At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10) ide...    29   2.4  
At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10) ide...    29   2.4  
At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10) ide...    29   2.4  
At5g24880.1 68418.m02946 expressed protein ; expression supporte...    29   3.2  
At3g48860.2 68416.m05337 expressed protein                             28   4.3  
At3g48860.1 68416.m05336 expressed protein                             28   4.3  
At2g42880.1 68415.m05309 mitogen-activated protein kinase, putat...    28   4.3  
At1g63300.1 68414.m07156 expressed protein similar to Intracellu...    28   4.3  
At4g11080.1 68417.m01800 high mobility group (HMG1/2) family pro...    28   5.7  
At4g10120.1 68417.m01655 sucrose-phosphate synthase, putative si...    27   9.9  
At3g05270.1 68416.m00575 expressed protein similar to endosome-a...    27   9.9  
At3g01560.1 68416.m00086 proline-rich family protein contains pr...    27   9.9  
At1g34050.1 68414.m04221 ankyrin repeat family protein contains ...    27   9.9  
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my...    27   9.9  

>At1g73570.1 68414.m08517 suppressor of lin-12-like protein-related
           / sel-1 protein-related similar to Sel-1 homolog
           precursor (Suppressor of lin-12-like protein)
           (Sel-1L)(SP:Q9UBV2) {Homo sapiens}
          Length = 604

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +1

Query: 28  GINKQANISNEVQILTNELNAASGKLNSMTELADQALKRARAVYDEALGLYAEVNTTLLP 207
           GI      S    IL +   AA G + S   LA + L++   +YD+A+ LYAE+  T + 
Sbjct: 136 GIGMMRETSRSKSILHHHFAAAGGNMQSKMALAFRYLRQN--MYDKAVELYAELAETAVN 193

Query: 208 DIKLNK 225
              ++K
Sbjct: 194 SFLISK 199


>At5g46460.1 68418.m05722 pentatricopeptide (PPR) repeat-containing
           protein contains INTERPRO:IPR002885 PPR repeats
          Length = 697

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +1

Query: 145 ARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRRLMRN 270
           +R V+DE +     V T LL    LNK HED++ +   ++RN
Sbjct: 279 SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320


>At2g45460.1 68415.m05654 forkhead-associated domain-containing
           protein / FHA domain-containing protein 
          Length = 915

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = +3

Query: 264 EKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAK 431
           EKS +++ L+++ EDT   L     R R L  Q  + Q    D   KL+EL  Q K
Sbjct: 422 EKSMQVETLMSKLEDTRQRLVCSENRNRLLEAQVSEEQLAFADAQKKLEELDLQVK 477


>At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein
           contains Pfam profile PF00488: MutS domain V
          Length = 857

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = +3

Query: 276 ELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDR-QEELNDLLAKLDELQAQAKNDVELTK 452
           +L  L  E E   H+L+   +R R LL++   + QE+LN   +K++ L A+ ++ +E+T+
Sbjct: 618 DLMNLYHELEHESHDLD---KRERALLKKETQKVQEDLNSAKSKMERLVAEFESQLEITQ 674

Query: 453 A 455
           A
Sbjct: 675 A 675


>At1g22260.1 68414.m02782 expressed protein
          Length = 857

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 20/84 (23%), Positives = 40/84 (47%)
 Frame = +3

Query: 255 TIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKN 434
           TID+  +E   L++++ D    + +       LLE     +++  +L  KL  L+ ++K 
Sbjct: 392 TIDKLESEAKGLVSKHADAESAISQLKEEMETLLESVKTSEDKKQELSLKLSSLEMESKE 451

Query: 435 DVELTKATLTAANEIYKTLKEFSD 506
             E  +A      E  +TL++ S+
Sbjct: 452 KCEKLQADAQRQVEELETLQKESE 475


>At2g27170.1 68415.m06029 structural maintenance of chromosomes
           (SMC) family protein similar to basement
           membrane-associated chondroitin proteoglycan Bamacan
           [Rattus norvegicus] GI:1785540; contains Pfam profile
           PF02463: RecF/RecN/SMC N terminal domain. No suitalble
           start codon was identified.
          Length = 1207

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/69 (26%), Positives = 34/69 (49%)
 Frame = +3

Query: 285 RLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLT 464
           +L  + +D    +   I+   D LEQ +  + E+ D L +L+ ++   ++ V+    T  
Sbjct: 304 KLELDVKDFQDRITGNIQSKNDALEQLNTVEREMQDSLRELEAIKPLYESQVDKENQTSK 363

Query: 465 AANEIYKTL 491
             NE+ KTL
Sbjct: 364 RINELEKTL 372


>At4g38710.1 68417.m05483 glycine-rich protein cylicin II - bovine,
           PIR2:I46014
          Length = 452

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 275 RAGPFDS*ERRHPSQFRGGHKARSGLAGTRSRQAGGTQRSP 397
           + G F+S  R   SQ+ GG  + S   G R  ++G    SP
Sbjct: 231 KRGSFESLSRNRDSQYGGGGGSESDTWGRRREESGAANGSP 271


>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
           to myosin heavy chain [Rana catesbeiana] GI:4249701
          Length = 583

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = +1

Query: 31  INKQANISNEVQILTNELNAAS----GKLNSMTELADQALKRARAVYDEALGLYAEVNTT 198
           +++  ++ +E++ + +E N A      KL S+TE AD++ KRA     E LG     NT 
Sbjct: 434 MSQYESLRSEMETMQSEKNKAIDEALAKLGSLTEEADKSGKRAENA-TEQLGAAQVTNTE 492

Query: 199 LLPDIKLNKLHED 237
           L  +++  K+  D
Sbjct: 493 LEAELRRLKVQCD 505


>At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10)
           identical to 14-3-3 protein GF14 epsilon GI:5802798,
           SP:P48347 from [Arabidopsis thaliana]
          Length = 251

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +3

Query: 291 IAENEDTLHNLEEGIRRGRDLLEQGHDRQEEL-NDLLAKLDELQAQAKNDVELTKATLTA 467
           I + E++  N +E ++R ++  ++  D   ++ ND+L+ +D+    + N VE T      
Sbjct: 67  IEQKEESKGN-DENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTVFFYKM 125

Query: 468 ANEIYKTLKEFS 503
             + Y+ L EFS
Sbjct: 126 KGDYYRYLAEFS 137


>At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10)
           identical to 14-3-3 protein GF14 epsilon GI:5802798,
           SP:P48347 from [Arabidopsis thaliana]
          Length = 254

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +3

Query: 291 IAENEDTLHNLEEGIRRGRDLLEQGHDRQEEL-NDLLAKLDELQAQAKNDVELTKATLTA 467
           I + E++  N +E ++R ++  ++  D   ++ ND+L+ +D+    + N VE T      
Sbjct: 67  IEQKEESKGN-DENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTVFFYKM 125

Query: 468 ANEIYKTLKEFS 503
             + Y+ L EFS
Sbjct: 126 KGDYYRYLAEFS 137


>At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10)
           identical to 14-3-3 protein GF14 epsilon GI:5802798,
           SP:P48347 from [Arabidopsis thaliana]
          Length = 254

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +3

Query: 291 IAENEDTLHNLEEGIRRGRDLLEQGHDRQEEL-NDLLAKLDELQAQAKNDVELTKATLTA 467
           I + E++  N +E ++R ++  ++  D   ++ ND+L+ +D+    + N VE T      
Sbjct: 67  IEQKEESKGN-DENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTVFFYKM 125

Query: 468 ANEIYKTLKEFS 503
             + Y+ L EFS
Sbjct: 126 KGDYYRYLAEFS 137


>At5g24880.1 68418.m02946 expressed protein ; expression supported
           by MPSS
          Length = 443

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 21/91 (23%), Positives = 41/91 (45%)
 Frame = +3

Query: 273 AELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTK 452
           AEL+  + +NED   ++EE     ++      ++ EE  D+  K+DE +   K D E +K
Sbjct: 268 AELEEKLIKNED---DIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTE-SK 323

Query: 453 ATLTAANEIYKTLKEFSDQ*PSRTSKRSKPR 545
              +      +  +E  ++   R  +  K +
Sbjct: 324 EVESVEETTQEKEEEVKEEGKERVEEEEKEK 354


>At3g48860.2 68416.m05337 expressed protein
          Length = 577

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
 Frame = +3

Query: 243 GDE*TIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDE--- 413
           GD+        ELD L  ENE+ L    E +RR  +   +   R +EL   +A L E   
Sbjct: 209 GDQREASALRDELDMLQEENENVL----EKLRRAEEKRVEAEARAKELEKQVASLGEGVS 264

Query: 414 LQAQAKNDVELTKATLTAANEIYKTLKEFSDQ 509
           L+A+  +  E       AA  + K  K   D+
Sbjct: 265 LEAKLLSRKEAALRQREAALNVAKQKKSGKDE 296


>At3g48860.1 68416.m05336 expressed protein
          Length = 494

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
 Frame = +3

Query: 243 GDE*TIDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDE--- 413
           GD+        ELD L  ENE+ L    E +RR  +   +   R +EL   +A L E   
Sbjct: 209 GDQREASALRDELDMLQEENENVL----EKLRRAEEKRVEAEARAKELEKQVASLGEGVS 264

Query: 414 LQAQAKNDVELTKATLTAANEIYKTLKEFSDQ 509
           L+A+  +  E       AA  + K  K   D+
Sbjct: 265 LEAKLLSRKEAALRQREAALNVAKQKKSGKDE 296


>At2g42880.1 68415.m05309 mitogen-activated protein kinase, putative
           / MAPK, putative (MPK20) mitogen-activated protein
           kinase (MAPK)(AtMPK20), PMID:12119167
          Length = 606

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 16  IAKDGINKQANISNEVQILTNELNAASG 99
           +A+ G+NK  NIS+ + I TN L A +G
Sbjct: 548 MARTGMNKAENISDRIIIDTNLLQATAG 575


>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
           protein transport protein USO1 (Swiss-Prot:P25386)
           [Saccharomyces cerevisiae]; similar to Myosin II heavy
           chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
           discoideum]
          Length = 1029

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +3

Query: 258 IDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKND 437
           +DEKS E+D      ED   NL + I+    +L++  +  ++  D L    E     + D
Sbjct: 705 LDEKSNEIDNQKRHEEDVTANLNQEIK----ILKEEIENLKKNQDSLMLQAEQAENLRVD 760

Query: 438 VELTKATLTAA 470
           +E TK ++  A
Sbjct: 761 LEKTKKSVMEA 771


>At4g11080.1 68417.m01800 high mobility group (HMG1/2) family
           protein similar to SP|P40618 High mobility group protein
           HMG2A {Gallus gallus}; contains Pfam profile PF00505:
           HMG (high mobility group) box
          Length = 446

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 22/90 (24%), Positives = 39/90 (43%)
 Frame = +3

Query: 261 DEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDV 440
           +EK A  D++  +N++      EG +R ++       ++EE    L K + LQ   K   
Sbjct: 287 EEKKAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEEEEFMKLHKQEALQLLKKK-- 344

Query: 441 ELTKATLTAANEIYKTLKEFSDQ*PSRTSK 530
           E T   +    E  K  K+  +  P++  K
Sbjct: 345 EKTDNIIKKTKETAKNKKKNENVDPNKPKK 374


>At4g10120.1 68417.m01655 sucrose-phosphate synthase, putative
           similar to sucrose-phosphate synthase, Zea mays,
           PIR2:JQ1329; contains non-consensus (GC) donor splice
           site at intron 4
          Length = 1050

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +3

Query: 324 EEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANE 476
           ++G+R  +  +E+   R +   DLL++L E + + KND E  K+ +    E
Sbjct: 120 DDGVRLSKRRIEREQGRNDAEEDLLSELSEGE-KDKNDGEKEKSEVVTTLE 169


>At3g05270.1 68416.m00575 expressed protein similar to
           endosome-associated protein (EEA1) (GI:1016368) [Homo
           sapiens]; similar to smooth muscle myosin heavy chain
           (GI:4417214) [Homo sapiens; contains Pfam profile
           PF05911: Plant protein of unknown function (DUF869)
          Length = 615

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +3

Query: 258 IDEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKND 437
           I+ K +E+ +L AEN++    L E  ++  DL       Q +LN     L EL+ +    
Sbjct: 393 IEGKLSEMKKLEAENQELELLLGESGKQMEDL-------QRQLNKAQVNLSELETRRAEK 445

Query: 438 VELT 449
           +ELT
Sbjct: 446 LELT 449


>At3g01560.1 68416.m00086 proline-rich family protein contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 511

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = +3

Query: 279 LDRLIAENEDTLHNLEEGIRRGRDLLE-QGHDRQEELNDLLAKLDELQAQAKNDVELTKA 455
           +DR + ++ DTL ++ EG+      LE + H+ +  ++DL   +D         +   K 
Sbjct: 134 IDRTMKKHTDTLLHVMEGVSARLSQLETRTHNLENLVDDLKVSVDNSHGSTDGKMRQLKN 193

Query: 456 TLTAANEIYKTLKEFSDQ*PSRTSK 530
            L       + LK+  +   ++ SK
Sbjct: 194 ILVEVQSGVQLLKDKQEILEAQLSK 218


>At1g34050.1 68414.m04221 ankyrin repeat family protein contains
           ankyrin repeat domains, Pfam:PF00023
          Length = 573

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 381 ELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQ*P 515
           E+  +L ++DE  A+  N    T   L A       LKEFSD+ P
Sbjct: 198 EITKMLLEIDESLAERVNKDGFTPLHLAAMKCSIPILKEFSDKAP 242


>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
           myosin II heavy chain (GI:19879404) [Loligo pealei];
           ESTs gb|AA042402,gb|ATTS1380 come from this gene
          Length = 828

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
 Frame = +3

Query: 261 DEKSAELDRLIAENEDTLHNLEEGIRRGRDLLEQGHDRQEELNDLLAKLD----ELQAQA 428
           +EK  +L+ +  +N      L   + + RDL E  +   E+L     +L+    E+    
Sbjct: 257 EEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEAT 316

Query: 429 KNDVELTKATLTAANEIYKTLKEFSDQ 509
              +EL      +  ++ KT+++FS +
Sbjct: 317 TRSIELEALHKHSELKVQKTMEDFSSR 343


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,864,400
Number of Sequences: 28952
Number of extensions: 189485
Number of successful extensions: 690
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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