Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0909
         (354 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D570E7 Cluster: PREDICTED: similar to Protein KI...    34   0.80 
UniRef50_Q9VYA7 Cluster: CG2691-PA; n=3; Sophophora|Rep: CG2691-...    33   1.1  
UniRef50_A4I4K1 Cluster: Putative uncharacterized protein; n=3; ...    33   1.4  
UniRef50_Q9HN60 Cluster: Ribonuclease Z; n=5; Halobacteriaceae|R...    31   4.3  
UniRef50_Q7QD52 Cluster: ENSANGP00000010910; n=2; Culicidae|Rep:...    30   9.9  
UniRef50_Q97A53 Cluster: Putative uncharacterized protein TVG098...    30   9.9  

>UniRef50_UPI0000D570E7 Cluster: PREDICTED: similar to Protein
            KIAA0690; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to Protein KIAA0690 - Tribolium castaneum
          Length = 1288

 Score = 33.9 bits (74), Expect = 0.80
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -3

Query: 235  SIRSGRSNRSRASTATVGSKYKTGGKGIHRNLDSA---ASVASTLGGDYRPXXXXXXXXX 65
            S++SG S+ S+       +KYKTGG GIHR   SA   +  +S  G +YR          
Sbjct: 1214 SVKSGVSSVSQPP-----AKYKTGGIGIHRATSSASVRSGASSVPGSEYRGKRAKGDVKK 1268

Query: 64   XXKHDPY 44
              K DPY
Sbjct: 1269 KGKPDPY 1275


>UniRef50_Q9VYA7 Cluster: CG2691-PA; n=3; Sophophora|Rep: CG2691-PA -
            Drosophila melanogaster (Fruit fly)
          Length = 1384

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = -3

Query: 247  DDILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNLDSAASVASTL 110
            DD +S++SG++        T  S+Y  GGKGIHR L +  S A ++
Sbjct: 1269 DDAMSMKSGKT--------TASSRYTAGGKGIHRQLTAGNSDAMSV 1306


>UniRef50_A4I4K1 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania infantum
          Length = 1261

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 286 AFEASEARNETRYDDILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNL 140
           + E  +     R   ILS+RS    RS  STA  G +   GG+G H +L
Sbjct: 780 SLERQQVNPFLRSASILSMRSSSLGRSSPSTAAAGGRSGRGGRGHHGSL 828


>UniRef50_Q9HN60 Cluster: Ribonuclease Z; n=5; Halobacteriaceae|Rep:
           Ribonuclease Z - Halobacterium salinarium (Halobacterium
           halobium)
          Length = 308

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = -3

Query: 286 AFEASEARNETRYDDILSIRSGRSNRSRAST--ATVGSKYKTGGKGIHRNLDSAASVA-S 116
           AFE + +     Y  +   R+GR +R+RA      VG K+ T   G    LD    V+  
Sbjct: 134 AFETAHSTASVGYALVEDDRTGRFDRARAEELGVPVGPKFSTLHDGQPVELDDGTVVSPE 193

Query: 115 TLGGDYRPXXXXXXXXXXXKHDP 47
            + GD RP            HDP
Sbjct: 194 QVVGDPRPGRTLVYTGDTRPHDP 216


>UniRef50_Q7QD52 Cluster: ENSANGP00000010910; n=2; Culicidae|Rep:
            ENSANGP00000010910 - Anopheles gambiae str. PEST
          Length = 1388

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 22/43 (51%), Positives = 24/43 (55%)
 Frame = -3

Query: 244  DILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNLDSAASVAS 116
            D LS RSG S  S        S+Y  GGKGIHR   +AASV S
Sbjct: 1269 DALSARSGMSGAS--------SRYVAGGKGIHR--PTAASVKS 1301


>UniRef50_Q97A53 Cluster: Putative uncharacterized protein
           TVG0980491; n=2; Thermoplasma|Rep: Putative
           uncharacterized protein TVG0980491 - Thermoplasma
           volcanium
          Length = 282

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -3

Query: 283 FEASEARNETRYDDILSIRSGR---SNRSRASTATVGSKYKTGGKGIHRNLDSAASVAST 113
           FE  +  NETR++D  +   GR          +  +GS Y   GKG+ R L S  ++++ 
Sbjct: 87  FELKDESNETRFNDGKADPEGRYVAGTMDLKESRPIGSLYVFNGKGVRRLL-SNLTISNG 145

Query: 112 LGGDYR 95
           +  D R
Sbjct: 146 IAWDTR 151


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,740,880
Number of Sequences: 1657284
Number of extensions: 3728288
Number of successful extensions: 11605
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11597
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)