Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0909
         (354 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    23   1.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   3.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   3.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   6.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   6.5  

>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 81  LAFFGL*SPPSVDATDAAESKFLCIPFPPVLYLEPTV 191
           +A FG    P V  +D  E K+L +     L L P V
Sbjct: 27  VALFGKEKKPIVSYSDLQEMKYLELVIKEALRLYPLV 63


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B
          protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 1  FFFFEICPGQG*VGSKDRACP 63
          F FF++C G    G+K +  P
Sbjct: 16 FLFFDLCHGVRAPGAKKKVGP 36


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A
          protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 1  FFFFEICPGQG*VGSKDRACP 63
          F FF++C G    G+K +  P
Sbjct: 16 FLFFDLCHGVRAPGAKKKVGP 36


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 138 SKFLCIPF 161
           S+FLC+PF
Sbjct: 77  SRFLCLPF 84


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 138 SKFLCIPF 161
           S+FLC+PF
Sbjct: 33  SRFLCLPF 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,796
Number of Sequences: 336
Number of extensions: 887
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)